Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Excinuclease ABC, C subunit, N-terminal

Term: IPR000305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene713 SustainPine v3.0 2977
AutoFact: serine/threonine-protein kinase-like protein CCR1 [Arabidopsis thaliana] sp|Q9S7D9.1|ACCR1_ARATH RecName: Full=Serine/threonine-protein kinase-like protein CCR1; AltName: Full=Protein CRINKLY 4 RELATED 1; Short=AtCRR1; Flags: Precursor gb|AAF23257.1|AC015 0.0
FL-Next: sp=Serine/threonine-protein kinase-like protein CCR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP binding protein, putative 9.225e-07
Complete
sp_v3.0_unigene3160 SustainPine v3.0 2620
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] 0.0
FL-Next: tr=2-oxoglutarate dehydrogenase, putative; Ricinus communis (Castor bean). 0.0
Sma3: 2-oxoglutarate dehydrogenase, putative 1.003e-08
C-terminus
sp_v3.0_unigene8157 SustainPine v3.0 1225
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 4.835e-15
N-terminus
sp_v3.0_unigene8568 SustainPine v3.0 549
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene8615 SustainPine v3.0 1795
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13559 SustainPine v3.0 991
AutoFact: GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana] dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana] gb|AAY56 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g30350 1.463e-09
Putative Complete
sp_v3.0_unigene16691 SustainPine v3.0 699
AutoFact: GIY-YIG catalytic domain-containing protein [Arabidopsis thaliana] dbj|BAD43152.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD43156.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD44370.1| hypothetical protein [Arabidopsis thaliana] gb|AAY56 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g30350 1.248e-09
Putative C-terminus
sp_v3.0_unigene30616 SustainPine v3.0 1251
AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene46928 SustainPine v3.0 183
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q84LK0_ARATH 3.0e-14
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 2.577e-11
Internal
sp_v3.0_unigene54034 SustainPine v3.0 321
AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54611 SustainPine v3.0 345
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene62281 SustainPine v3.0 250
AutoFact: MutS_V domain containing protein 1.0e-18
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 1.767e-22
Internal
sp_v3.0_unigene64094 SustainPine v3.0 218
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQS1_RICCO 3.0e-22
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 1.552e-22
Internal
sp_v3.0_unigene67410 SustainPine v3.0 311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g30350 9.277e-10
Putative N-terminus
sp_v3.0_unigene69853 SustainPine v3.0 433
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 1.0e-36
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 2.271e-22
Internal
sp_v3.0_unigene75124 SustainPine v3.0 363
AutoFact: DNA mismatch repair protein [Zea mays] gb|AAX53096.1| DNA mismatch repair protein [Zea mays] 3.0e-15
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 6.01e-15
C-terminus
sp_v3.0_unigene77893 SustainPine v3.0 327
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene95337 SustainPine v3.0 308
AutoFact: DNA mismatch repair protein n=1 Tax=Cucumis sativus RepID=B3U2A3_CUCSA 5.0e-24
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 9.412e-23
Putative C-terminus
sp_v3.0_unigene99934 SustainPine v3.0 390
AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 3.381e-08
Internal
sp_v3.0_unigene102683 SustainPine v3.0 825
AutoFact: oxoglutarate dehydrogenase - like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: 2-oxoglutarate dehydrogenase, putative 1.013e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain