Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene49894 SustainPine v3.0 393
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 1 4.849e-09
Putative N-terminus
sp_v3.0_unigene50699 SustainPine v3.0 559
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene51376 SustainPine v3.0 529
AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q94LA8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.696e-20
Internal
sp_v3.0_unigene51578 SustainPine v3.0 234
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51824 SustainPine v3.0 219
AutoFact: Pyrophosphate-energized vacuolar membrane proton pump n=21 Tax=Magnoliophyta RepID=AVP_VIGRR 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene52473 SustainPine v3.0 326
AutoFact: Caltractin, putative n=1 Tax=Ricinus communis RepID=B9SC54_RICCO 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centrin 1.325e-13
Putative N-terminus
sp_v3.0_unigene52673 SustainPine v3.0 208
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 35A dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 5.203e-08
Internal
sp_v3.0_unigene53781 SustainPine v3.0 455
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 2.918e-08
Putative C-terminus
sp_v3.0_unigene55117 SustainPine v3.0 335
AutoFact: ATP-dependent RNA helicase DBP5 n=7 Tax=Arthrodermataceae RepID=C5FBW6_ARTOC 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A 4.471e-08
Putative C-terminus
sp_v3.0_unigene56105 SustainPine v3.0 458
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SGA4_RICCO 8.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 1.24716e-43
Internal
sp_v3.0_unigene57355 SustainPine v3.0 152
AutoFact: Vacuolar H+-translocating inorganic pyrophosphatase n=2 Tax=Zea mays RepID=Q4W437_MAIZE 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vacuolar H+-pyrophosphatase 6.618e-11
Internal
sp_v3.0_unigene57939 SustainPine v3.0 356
AutoFact: Caltractin n=3 Tax=Chlorophyta RepID=CATR_SCHDU 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Centrin 7.466e-31
N-terminus
sp_v3.0_unigene58099 SustainPine v3.0 439
AutoFact: Inhibitor_I9 domain containing protein 7.0e-10
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus
sp_v3.0_unigene58377 SustainPine v3.0 468
AutoFact: Peptidase_S8 domain containing protein 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xylem serine proteinase 1, putative 1.19194e-41
Internal
sp_v3.0_unigene58430 SustainPine v3.0 413
AutoFact: Putative cytochrome P450 [Oryza sativa Japonica Group] gb|EAY89085.1| hypothetical protein OsI_10573 [Oryza sativa Indica Group] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 8.488e-20
N-terminus
sp_v3.0_unigene58540 SustainPine v3.0 225
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 7.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase-like protein 2.538e-22
Internal
sp_v3.0_unigene58655 SustainPine v3.0 357
AutoFact: ATP-dependent RNA helicase [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 13 2.532e-08
Internal
sp_v3.0_unigene58749 SustainPine v3.0 359
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.017e-10
Internal
sp_v3.0_unigene59082 SustainPine v3.0 417
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 4.0e-36
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 7.701e-11
Internal
sp_v3.0_unigene59191 SustainPine v3.0 380
AutoFact: Cytochrome P450 family protein (Fragment) n=6 Tax=Pseudotsuga RepID=C6FA27_PSEMZ 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 1.934e-21
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain