Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156104 SustainPine v3.0 604
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.316e-09
C-terminus
sp_v3.0_unigene156238 SustainPine v3.0 537
• AutoFact: N-alpha-acetyltransferase 10, NatA catalytic subunit n=10 Tax=Eutheria RepID=NAA10_MOUSE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.628e-11
C-terminus
sp_v3.0_unigene156321 SustainPine v3.0 329
• AutoFact: ATP-dependent RNA helicase n=1 Tax=Dictyostelium fasciculatum RepID=F4Q0Y8_9MYCE 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene156459 SustainPine v3.0 486
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] 6.0e-21
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157000 SustainPine v3.0 364
• AutoFact: Inorganic diphosphatase [marine gamma proteobacterium HTCC2080] gb|EAW39645.1| Inorganic diphosphatase [marine gamma proteobacterium HTCC2080] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H+-translocating pyrophosphatase family 2.932e-14
Internal
sp_v3.0_unigene157417 SustainPine v3.0 440
• AutoFact: Centrin n=1 Tax=Volvox carteri f. nagariensis RepID=D8UCZ3_VOLCA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Centrin 2.88e-22
C-terminus
sp_v3.0_unigene157425 SustainPine v3.0 448
• AutoFact: eukaryotic initiation factor 4A-III [Danio rerio] sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III; Short=eIF-4A-III; Short=eIF4A-III; AltName: Full=ATP-dependent RNA helicase DDX48; AltName: Full=ATP-dependent RNA helicase eIF4A- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.053e-09
C-terminus
sp_v3.0_unigene157633 SustainPine v3.0 253
• AutoFact: putative eukaryotic translation initiation factor 4A [Maconellicoccus hirsutus] 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157797 SustainPine v3.0 465
• AutoFact: RNA helicase involved in maturation of 18S rRNA [Scheffersomyces stipitis CBS 6054] sp|A3GFV3.1|FAL1_PICST RecName: Full=ATP-dependent RNA helicase FAL1 gb|EAZ63408.1| RNA helicase involved in maturation of 18S rRNA [Pichia stipitis CBS 6054] 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.406e-09
C-terminus
sp_v3.0_unigene158186 SustainPine v3.0 550
• AutoFact: RNA helicase [Oryza sativa Japonica Group] 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.213e-14
C-terminus
sp_v3.0_unigene158538 SustainPine v3.0 492
• AutoFact: PremRNAsplicing factor 38B putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WLM7_9STRA 2.0e-14
• FL-Next: tr=PremRNAsplicing factor 38B putative; Albugo laibachii Nc14. 0.0
Internal
sp_v3.0_unigene158591 SustainPine v3.0 356
• AutoFact: Caltractin (Centrin), putative n=2 Tax=Sarcocystidae RepID=B9QDJ3_TOXGO 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Centrin 5.276e-35
Putative N-terminus
sp_v3.0_unigene158677 SustainPine v3.0 397
• AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC11C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.182e-11
C-terminus
sp_v3.0_unigene158989 SustainPine v3.0 393
• AutoFact: Eukaryotic initiation factor 4A n=3 Tax=Ditrysia RepID=B0FYV2_PLUXY 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Eukaryotic initiation factor 4A-like protein 9.322e-08
Internal
sp_v3.0_unigene159030 SustainPine v3.0 524
• AutoFact: RecName: Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2; AltName: Full=ATP-dependent RNA helicase eIF4A-2 emb|CAA43513.1| nicotiana eukaryotic translation initiation factor 4A [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.389e-09
Internal
sp_v3.0_unigene159065 SustainPine v3.0 205
• AutoFact: Acetyltransferase (Fragment) n=6 Tax=Panarthropoda RepID=D0UKN6_9MYRI 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.538e-11
Internal
sp_v3.0_unigene159369 SustainPine v3.0 136
• AutoFact: putative RNA helicase (ISS) [Ostreococcus tauri] emb|CAL53470.1| putative RNA helicase (ISS) [Ostreococcus tauri] 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 6 1.165e-08
Internal
sp_v3.0_unigene159449 SustainPine v3.0 379
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.574e-15
Putative C-terminus
sp_v3.0_unigene159602 SustainPine v3.0 301
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.755e-10
Internal
sp_v3.0_unigene161165 SustainPine v3.0 211
• AutoFact: RNA helicase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.821e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain