Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene74760 SustainPine v3.0 326
• AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.032e-08
C-terminus
sp_v3.0_unigene75161 SustainPine v3.0 326
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 5.0e-27
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative pol polyprotein 1.264e-08
Putative C-terminus
sp_v3.0_unigene75208 SustainPine v3.0 405
• AutoFact: T-complex protein 1 subunit delta n=1 Tax=Physarum polycephalum RepID=Q8T5T6_PHYPO 1.0e-37
• FL-Next: sp=T-complex protein 1 subunit delta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, delta subunit 0.0
N-terminus
sp_v3.0_unigene75620 SustainPine v3.0 464
• AutoFact: subtilisin-like protease [Arabidopsis thaliana] 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 7.56701e-44
Internal
sp_v3.0_unigene76243 SustainPine v3.0 119
• AutoFact: TCP-1/cpn60 chaperonin family protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AC79_CRYMR 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76627 SustainPine v3.0 205
• AutoFact: Cytochrome P450 CYP94B1 n=4 Tax=Arabidopsis RepID=Q9FMV7_ARATH 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 1.348e-20
Internal
sp_v3.0_unigene76764 SustainPine v3.0 279
• AutoFact: Pre-mRNA-processing ATP-dependent RNA helicase PRP5 n=1 Tax=Gibberella zeae PH-1 RepID=PRP5_GIBZE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.754e-12
Internal
sp_v3.0_unigene76827 SustainPine v3.0 280
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xylem serine proteinase 1, putative 1.316e-24
Internal
sp_v3.0_unigene76831 SustainPine v3.0 301
• AutoFact: RNA helicase (Dbp), putative n=2 Tax=Trichocomaceae RepID=B6QP35_PENMQ 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.563e-08
Internal
sp_v3.0_unigene77325 SustainPine v3.0 218
• AutoFact: inorganic pyrophosphatase [Nicotiana rustica] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: H+-translocating pyrophosphatase family 3.042e-11
Internal
sp_v3.0_unigene77567 SustainPine v3.0 260
• AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.996e-08
Internal
sp_v3.0_unigene77649 SustainPine v3.0 284
• AutoFact: ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130] 7.0e-32
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 51; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 27 1.042e-08
Internal
sp_v3.0_unigene77806 SustainPine v3.0 290
• AutoFact: Mitochondrial intermediate peptidase, putative n=1 Tax=Ricinus communis RepID=B9R9Q2_RICCO 7.0e-16
• FL-Next: tr=Mitochondrial intermediate peptidase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene78075 SustainPine v3.0 329
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78576 SustainPine v3.0 279
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.004e-08
Internal
sp_v3.0_unigene78745 SustainPine v3.0 110
• AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin [Medicago truncatula] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 2.905e-32
Internal
sp_v3.0_unigene79376 SustainPine v3.0 156
• AutoFact: ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] gb|EAU80684.1| ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene79539 SustainPine v3.0 251
• AutoFact: Apo-Eif4aiii n=2 Tax=Aureococcus anophagefferens RepID=F0Y6T8_9STRA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 1.869e-08
C-terminus
sp_v3.0_unigene79570 SustainPine v3.0 307
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 n=2 Tax=Arabidopsis RepID=RH52_ARATH 3.0e-07
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 52; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 1.855e-08
Internal
sp_v3.0_unigene79635 SustainPine v3.0 281
• AutoFact: Cytochrome P450 family protein (Fragment) n=6 Tax=Pseudotsuga RepID=C6FA27_PSEMZ 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 4.676e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain