Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66458 SustainPine v3.0 349
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 5.379e-09
Internal
sp_v3.0_unigene67337 SustainPine v3.0 286
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4A9_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.978e-10
Internal
sp_v3.0_unigene67577 SustainPine v3.0 155
• AutoFact: putative DEAD-box ATP-dependent RNA helicase 33 [Arabidopsis thaliana] sp|O80792.1|RH33_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 33 gb|AAC26676.1| putative RNA helicase [Arabidopsis thaliana] gb|AEC06130.1| putative DEAD-box ATP-de 2.0e-08
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 48; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene68265 SustainPine v3.0 227
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 2.0e-11
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 45 9.358e-09
Internal
sp_v3.0_unigene69546 SustainPine v3.0 203
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S4I3_RICCO 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 57 4.49e-09
Internal
sp_v3.0_unigene69716 SustainPine v3.0 203
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene70042 SustainPine v3.0 489
• AutoFact: Tetratricopeptide repeat, putative [Oryza sativa Japonica Group] 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.632e-11
Internal
sp_v3.0_unigene70302 SustainPine v3.0 339
• AutoFact: Cytochrome P450 n=1 Tax=Panax notoginseng RepID=F4YF73_9APIA 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450, putative 1.46e-14
Internal
sp_v3.0_unigene70714 SustainPine v3.0 208
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9ST45_RICCO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71951 SustainPine v3.0 173
• AutoFact: Chaperonin containing t-complex protein 1, beta subunit, tcpb, putative n=1 Tax=Ricinus communis RepID=B9R8I3_RICCO 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1, alpha subunit 4.149e-25
Internal
sp_v3.0_unigene72561 SustainPine v3.0 242
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 n=3 Tax=Arabidopsis RepID=RH42_ARATH 6.0e-12
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 42 4.107e-09
Internal
sp_v3.0_unigene73222 SustainPine v3.0 152
• AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] gb|AAM97029.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN15497.1| cytochrome P450-like protein [Arabidopsis thaliana] dbj|BAE99010.1| cytochrome P450 like protein [Arabidopsis thaliana] gb|AED912 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73455 SustainPine v3.0 122
• AutoFact: Inorganic diphosphatase, H+-translocating, vacuolar membrane n=15 Tax=Poaceae RepID=Q67WN5_ORYSJ 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H+-pyrophosphatase 9.849e-15
Internal
sp_v3.0_unigene73496 SustainPine v3.0 229
• AutoFact: ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] gb|EAU80684.1| ATP-dependent RNA helicase eIF4A [Coprinopsis cinerea okayama7#130] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.681e-09
C-terminus
sp_v3.0_unigene73635 SustainPine v3.0 522
• AutoFact: Eukaryotic initiation factor 4A n=16 Tax=Schizophora RepID=IF4A_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 34 8.394e-08
Internal
sp_v3.0_unigene73839 SustainPine v3.0 438
• AutoFact: Cytochrome P450 A n=1 Tax=Capsicum annuum RepID=E3UTN3_CAPAN 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.452e-24
Internal
sp_v3.0_unigene73854 SustainPine v3.0 382
• AutoFact: putative serine protease [Populus x canadensis] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 0.0
Internal
sp_v3.0_unigene74151 SustainPine v3.0 327
• AutoFact: Cytochrome P450 704C1 n=1 Tax=Pinus taeda RepID=C04C1_PINTA 2.0e-27
• FL-Next: sp=Cytochrome P450 704C1; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cytochrome P450 1.021e-27
Internal
sp_v3.0_unigene74609 SustainPine v3.0 457
• AutoFact: ATP-dependent RNA helicase DBP8 n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=DBP8_CRYNB 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74748 SustainPine v3.0 257
• AutoFact: putative cytochrome P450 protein [Oryza sativa Japonica Group] gb|AAP54351.1| Cytochrome P450 family protein, expressed [Oryza sativa Japonica Group] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.294e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain