Sustainpine_db
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Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76961 SustainPine v3.0 138
AutoFact: Homeobox protein n=1 Tax=Gossypium hirsutum RepID=A9PL22_GOSHI 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 1.273e-15
Internal
sp_v3.0_unigene78140 SustainPine v3.0 331
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 1.0e-29
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 2.088e-13
Internal
sp_v3.0_unigene93753 SustainPine v3.0 1754
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 3.006e-17
C-terminus
sp_v3.0_unigene94951 SustainPine v3.0 1152
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX27; AltName: Full=HD-ZIP protein HOX27; AltName: Full=Homeodomain transcription factor HOX27; AltName: Full=OsHox27 dbj|BAD17827.1| putative homeobox-leucine zipper protein [Oryza sativa Japonica Group] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 8.097e-17
Complete
sp_v3.0_unigene95905 SustainPine v3.0 468
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 1.27e-17
Internal
sp_v3.0_unigene95956 SustainPine v3.0 622
AutoFact: homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana] sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 dbj|BAE99427.1| homeobox protein [Ara 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene96494 SustainPine v3.0 409
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX1; AltName: Full=HD-ZIP protein HOX1; AltName: Full=Homeodomain transcription factor HOX1; AltName: Full=OsHox1 gb|AAF19980.1|AF211193_1 homeodomain-leucine zipper transcription factor [Oryza sativa Indica 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type II homeodomain-leucine zipper protein 4.504e-08
C-terminus
sp_v3.0_unigene102704 SustainPine v3.0 397
AutoFact: homeobox-leucine zipper protein HAT14 [Arabidopsis thaliana] sp|P46665.3|HAT14_ARATH RecName: Full=Homeobox-leucine zipper protein HAT14; AltName: Full=Homeodomain-leucine zipper protein HAT14; Short=HD-ZIP protein 14 dbj|BAE99427.1| homeobox protein [Ara 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 6.902e-17
C-terminus
sp_v3.0_unigene104396 SustainPine v3.0 484
AutoFact: Unassigned protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene113409 SustainPine v3.0 388
AutoFact: Homeodomain protein HOX3 n=1 Tax=Gossypium hirsutum RepID=Q66Q67_GOSHI 6.02558e-44
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 3.336e-17
N-terminus
sp_v3.0_unigene118927 SustainPine v3.0 158
AutoFact: Unassigned protein 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126156 SustainPine v3.0 384
AutoFact: homeobox-leucine zipper protein [Glycine max] 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.601e-17
Internal
sp_v3.0_unigene126339 SustainPine v3.0 291
AutoFact: HD domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ03_MALDO 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein ATHB-4 1.298e-16
Internal
sp_v3.0_unigene128863 SustainPine v3.0 384
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 4.0e-20
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 4.213e-08
N-terminus
sp_v3.0_unigene130650 SustainPine v3.0 358
AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein HAT14 7.184e-11
C-terminus
sp_v3.0_unigene131594 SustainPine v3.0 391
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 4.0e-23
FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Homeobox-leucine zipper-like protein 6.823e-06
Internal
sp_v3.0_unigene132447 SustainPine v3.0 339
AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox-leucine zipper protein ATHB-4 1.57e-16
Putative C-terminus
sp_v3.0_unigene138348 SustainPine v3.0 314
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 8.0e-38
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Homeobox protein, putative 1.33e-15
C-terminus
sp_v3.0_unigene140658 SustainPine v3.0 236
AutoFact: Homeodomain leucine-zipper 1 n=1 Tax=Nicotiana benthamiana RepID=C6FFS4_NICBE 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.174e-14
Internal
sp_v3.0_unigene142508 SustainPine v3.0 352
AutoFact: RecName: Full=Homeobox-leucine zipper protein HOX1; AltName: Full=HD-ZIP protein HOX1; AltName: Full=Homeodomain transcription factor HOX1; AltName: Full=OsHox1 gb|AAF19980.1|AF211193_1 homeodomain-leucine zipper transcription factor [Oryza sativa Indica 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 7.004e-17
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain