Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-CH-type

Term: IPR011016  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127987 SustainPine v3.0 872
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane associated ring finger 1,8, putative 1.341e-19
N-terminus
sp_v3.0_unigene128085 SustainPine v3.0 817
AutoFact: zinc finger (C3HC4-type RING finger)protein-like [Oryza sativa Japonica Group] dbj|BAD37481.1| zinc finger (C3HC4-type RING finger)protein-like [Oryza sativa Japonica Group] 6.0e-12
FL-Next: tr=Ssm4 protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene130855 SustainPine v3.0 166
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-15
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene133147 SustainPine v3.0 604
AutoFact: shaggy-like kinase alpha [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 1.119e-20
Putative Complete
sp_v3.0_unigene142024 SustainPine v3.0 266
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Zinc finger (C3HC4-type RING finger) protein-like 2.633e-08
Internal
sp_v3.0_unigene142185 SustainPine v3.0 230
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001030936.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAT06458.1| At2g01275 [Arabidopsis thaliana] gb|AEC05426.1| RING/FYVE/PHD zinc finger-containing 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane associated ring finger 1,8, putative 4.075e-19
Internal
sp_v3.0_unigene148337 SustainPine v3.0 465
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein 6.173e-10
Internal
sp_v3.0_unigene148374 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene151264 SustainPine v3.0 519
AutoFact: 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Dictyostelium purpureum RepID=F1A2S8_DICPU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxyisobutyrate dehydrogenase 4.361e-09
Putative C-terminus
sp_v3.0_unigene157288 SustainPine v3.0 456
AutoFact: shaggy-related protein kinase 3 [Physcomitrella patens] gb|AAQ23113.1| shaggy-related protein kinase 3 [Physcomitrella patens] 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 9.311e-17
Putative C-terminus
sp_v3.0_unigene164502 SustainPine v3.0 314
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb10g027165; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene164564 SustainPine v3.0 168
AutoFact: Zinc finger (C3HC4-type RING finger)protein-like n=4 Tax=Poaceae RepID=Q67WE0_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein Sb10g025050; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene183195 SustainPine v3.0 878
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane associated ring finger 1,8, putative 3.317e-08
Putative C-terminus
sp_v3.0_unigene189087 SustainPine v3.0 399
AutoFact: Glycogen synthase kinase-3 beta, putative n=1 Tax=Ricinus communis RepID=B9RDL4_RICCO 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 6.591e-21
Internal
sp_v3.0_unigene189653 SustainPine v3.0 505
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AED91346.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative Complete
sp_v3.0_unigene204038 SustainPine v3.0 289
AutoFact: Unassigned protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene207758 SustainPine v3.0 598
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S9C1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.972e-09
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain