Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-CH-type

Term: IPR011016  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66871 SustainPine v3.0 242
AutoFact: Membrane associated ring finger 1,8, putative n=1 Tax=Ricinus communis RepID=B9S8W6_RICCO 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene69974 SustainPine v3.0 437
AutoFact: RINGv domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77268 SustainPine v3.0 479
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB11496.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31206.1| AT5g62460/K19B1_7 [Arabidopsis thaliana] gb|AAM98316.1| At5g62460/K19B1_7 [Arabidopsis thaliana] gb|AED97609. 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78077 SustainPine v3.0 278
AutoFact: [A] COG5239 mRNA deadenylase, exonuclease subunit and related nucleases 1.0e-05
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene78802 SustainPine v3.0 336
AutoFact: CMGC/GSK protein kinase n=2 Tax=Agaricales RepID=A8NGS2_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 1.296e-16
Internal
sp_v3.0_unigene93604 SustainPine v3.0 745
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB11496.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31206.1| AT5g62460/K19B1_7 [Arabidopsis thaliana] gb|AAM98316.1| At5g62460/K19B1_7 [Arabidopsis thaliana] gb|AED97609. 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein 3.148e-08
C-terminus
sp_v3.0_unigene93649 SustainPine v3.0 909
AutoFact: [K] COG1678 Putative transcriptional regulator 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene94440 SustainPine v3.0 1286
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein, putative 1.27e-09
Complete
sp_v3.0_unigene95245 SustainPine v3.0 447
AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene99729 SustainPine v3.0 538
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAO00881.1| putative protein [Arabidopsis thaliana] gb|AAP37815.1| At5g63780 [Arabidopsis thaliana] gb|AED97797.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 5.0e-35
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene100275 SustainPine v3.0 658
AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxyisobutyrate dehydrogenase 4.17e-09
N-terminus
sp_v3.0_unigene100465 SustainPine v3.0 849
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAC06154.1| expressed protein [Arabidopsis thaliana] gb|AAO00741.1| Unknown protein [Arabidopsis thaliana] gb|AAP13386.1| At2g45530 [Arabidopsis thaliana] gb|AEC10566.1| RING/U-box domain-cont 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_105, whole genome shotgun sequence 9.496e-06
C-terminus
sp_v3.0_unigene100729 SustainPine v3.0 279
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene101340 SustainPine v3.0 1040
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB11496.1| unnamed protein product [Arabidopsis thaliana] gb|AAL31206.1| AT5g62460/K19B1_7 [Arabidopsis thaliana] gb|AAM98316.1| At5g62460/K19B1_7 [Arabidopsis thaliana] gb|AED97609. 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane associated ring finger 1,8, putative 1.479e-15
Putative Complete
sp_v3.0_unigene102403 SustainPine v3.0 234
AutoFact: RING/FYVE/PHD zinc finger-containing protein n=4 Tax=Arabidopsis RepID=F4KCH0_ARATH 2.0e-18
FL-Next: tr=RING/FYVE/PHD zinc finger-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105377 SustainPine v3.0 505
AutoFact: SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AED98309.1| SEC-C motif-containing protein / OTU-like cysteine protease family protein [Arabidopsis thaliana] 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene105837 SustainPine v3.0 329
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_849790.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001117462.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAF87887.1| 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g22120 5.237e-09
Putative N-terminus
sp_v3.0_unigene108480 SustainPine v3.0 260
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene113948 SustainPine v3.0 650
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v3.0_unigene126014 SustainPine v3.0 173
AutoFact: SSM4 like RING finger protein [Cryptosporidium parvum Iowa II] gb|EAK88756.1| SSM4 like RING finger protein [Cryptosporidium parvum Iowa II] 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain