Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AMP-dependent synthetase/ligase

Term: IPR000873  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene113525 SustainPine v3.0 313
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 7.425e-15
Internal
sp_v3.0_unigene114042 SustainPine v3.0 496
• AutoFact: Acyl:coa ligase acetate-coa synthetase-like protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H653_POPTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase acetate-coa synthetase-like protein 1.177e-11
N-terminus
sp_v3.0_unigene114269 SustainPine v3.0 405
• AutoFact: long-chain-fatty-acid-CoA ligase-like protein [Arabidopsis thaliana] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Long-chain-fatty-acid-CoA ligase-like protein 8.693e-10
Internal
sp_v3.0_unigene114344 SustainPine v3.0 676
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollenless3 1.188e-11
N-terminus
sp_v3.0_unigene116336 SustainPine v3.0 354
• AutoFact: AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] gb|AED94029.1| AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] 4.0e-05
• FL-Next: sp=Putative acyl-activating enzyme 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene117863 SustainPine v3.0 278
• AutoFact: 4-coumarate-coa ligase n=2 Tax=Populus trichocarpa RepID=B9H3P7_POPTR 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 1.84e-08
N-terminus
sp_v3.0_unigene118051 SustainPine v3.0 328
• AutoFact: Acetate--CoA ligase n=1 Tax=Schizophyllum commune H4-8 RepID=D8Q886_SCHCM 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acetyl CoA synthetase 1.264e-16
Internal
sp_v3.0_unigene119756 SustainPine v3.0 192
• AutoFact: AMP-binding protein n=3 Tax=Arabidopsis RepID=Q9LSQ0_ARATH 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP-binding protein 2.048e-11
N-terminus
sp_v3.0_unigene120426 SustainPine v3.0 464
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SRD9_RICCO 6.0e-33
• FL-Next: sp=2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121898 SustainPine v3.0 420
• AutoFact: Unassigned protein
• FL-Next: sp=Mediator of RNA polymerase II transcription subunit 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Os05g0447500 protein 9.747e-06
N-terminus
sp_v3.0_unigene127292 SustainPine v3.0 1472
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Acyl:coa ligase 1.707e-34
C-terminus
sp_v3.0_unigene127435 SustainPine v3.0 510
• AutoFact: AMP-dependent synthetase and ligase-like protein [Arabidopsis thaliana] gb|AAM28620.1|AF503762_1 adenosine monophosphate binding protein 3 AMPBP3 [Arabidopsis thaliana] emb|CAB62011.1| 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] gb|AAK92759 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-CoA ligase-like protein 8.339e-09
Internal
sp_v3.0_unigene127584 SustainPine v3.0 942
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene129080 SustainPine v3.0 330
• AutoFact: Putative AMP-binding protein [Oryza sativa Japonica Group] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 3.967e-11
C-terminus
sp_v3.0_unigene129967 SustainPine v3.0 484
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene130042 SustainPine v3.0 372
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollenless3 9.213e-12
N-terminus
sp_v3.0_unigene130457 SustainPine v3.0 607
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.164e-38
C-terminus
sp_v3.0_unigene130702 SustainPine v3.0 428
• AutoFact: Long-chain-fatty-acid-CoA ligase-like protein n=4 Tax=Arabidopsis RepID=Q9LW70_ARATH 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Long-chain-fatty-acid-CoA ligase-like protein 1.736e-09
Internal
sp_v3.0_unigene131114 SustainPine v3.0 376
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S0G8_RICCO 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent CoA ligase, putative 1.802e-07
Internal
sp_v3.0_unigene131479 SustainPine v3.0 489
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] emb|CAB45885.1| putative protein [Arabidopsis thaliana] emb|CAB79090.1| putative protein [Arabidopsis thaliana] gb|AEE84373.1| tetratricopeptide repeat-containing protein [Arabidopsis thal 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pollenless3 1.164e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain