Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: AMP-dependent synthetase/ligase

Term: IPR000873  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49676 SustainPine v3.0 1033
• AutoFact: long chain acyl-CoA synthetase [Brassica napus] 7.0e-14
• FL-Next: sp=Long chain acyl-CoA synthetase 9, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative acyl-CoA synthetase 2.418e-07
Internal
sp_v3.0_unigene50698 SustainPine v3.0 225
• AutoFact: AMP-binding protein n=6 Tax=Poaceae RepID=B4FAE2_MAIZE 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase acetate-coa synthetase-like protein 8.21e-23
Internal
sp_v3.0_unigene51455 SustainPine v3.0 646
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-23
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: 4-coumarate:CoA ligase 1.523e-06
Internal
sp_v3.0_unigene51917 SustainPine v3.0 227
• AutoFact: 4-coumarate--CoA ligase-like 7 n=3 Tax=Brassicaceae RepID=4CLL7_ARATH 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene52547 SustainPine v3.0 385
• AutoFact: PREDICTED: similar to adenosine monophosphate binding protein 1 AMPBP1 n=1 Tax=Vitis vinifera RepID=UPI0001985120 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase acetate-coa synthetase-like protein 2.249e-18
Internal
sp_v3.0_unigene52953 SustainPine v3.0 395
• AutoFact: 4-coumarate--CoA ligase-like 4 n=3 Tax=Oryza sativa RepID=4CLL4_ORYSJ 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 8.438e-08
Internal
sp_v3.0_unigene53565 SustainPine v3.0 232
• AutoFact: Unassigned protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene55235 SustainPine v3.0 272
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 7.502e-09
Internal
sp_v3.0_unigene55750 SustainPine v3.0 215
• AutoFact: 4-coumarate-CoA ligase (Fragment) n=2 Tax=Lactuca sativa RepID=Q400R6_LACSA 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55808 SustainPine v3.0 316
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 8.559e-08
Internal
sp_v3.0_unigene55965 SustainPine v3.0 436
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.433e-27
N-terminus
sp_v3.0_unigene56720 SustainPine v3.0 365
• AutoFact: putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group] dbj|BAD38427.1| putative 6-4 photolyase (UVR3) [Oryza sativa Japonica Group] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 6-4 photolyase 3.801e-09
Internal
sp_v3.0_unigene58472 SustainPine v3.0 492
• AutoFact: AMP-dependent synthetase and ligase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FL37_9RHOB 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58608 SustainPine v3.0 191
• AutoFact: probable acyl-CoA synthetase, 62297-59022 [imported] - Arabidopsis thaliana [Oryza sativa Japonica Group] 4.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59022 SustainPine v3.0 466
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 0.0
Internal
sp_v3.0_unigene59189 SustainPine v3.0 392
• AutoFact: Acyl:coa ligase acetate-coa synthetase-like protein n=4 Tax=Populus trichocarpa RepID=B9GUB7_POPTR 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 3.736e-34
Internal
sp_v3.0_unigene59903 SustainPine v3.0 305
• AutoFact: RVT_2 domain containing protein 8.0e-29
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative uncharacterized protein 9.904e-14
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
• AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene62026 SustainPine v3.0 209
• AutoFact: acyl-activating enzyme 14 [Arabidopsis thaliana] sp|Q8VYJ1.1|MENE_ARATH RecName: Full=2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal; AltName: Full=Acyl-activating enzyme 14; AltName: Full=O-succinylbenzoyl-CoA ligase; Flags: Precursor gb|AAL50 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62321 SustainPine v3.0 120
• AutoFact: PREDICTED: similar to adenosine monophosphate binding protein 1 AMPBP1 n=1 Tax=Vitis vinifera RepID=UPI0001985120 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 4.937e-15
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain