Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AMP-dependent synthetase/ligase

Term: IPR000873  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene31154 SustainPine v3.0 2477
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene34070 SustainPine v3.0 3270
• AutoFact: long chain acyl-CoA synthetase 9 [Arabidopsis thaliana] sp|Q9CAP8.1|LACS9_ARATH RecName: Full=Long chain acyl-CoA synthetase 9, chloroplastic gb|AAG51668.1|AC010704_12 putative acyl-CoA synthetase; 62297-59022 [Arabidopsis thaliana] gb|AAM28876.1|AF503759 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acyl-CoA synthetase 1.539e-10
Complete
sp_v3.0_unigene34128 SustainPine v3.0 2424
• AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
• FL-Next: sp=Long chain acyl-CoA synthetase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative acyl-CoA synthetase 5.455e-23
Complete
sp_v3.0_unigene36080 SustainPine v3.0 484
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 3.86e-38
C-terminus
sp_v3.0_unigene36768 SustainPine v3.0 455
• AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9S6X4_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 7.488e-31
C-terminus
sp_v3.0_unigene36823 SustainPine v3.0 474
• AutoFact: ACS2 n=1 Tax=Ricinus communis RepID=A1X860_RICCO 4.0e-19
• FL-Next: sp=Long chain acyl-CoA synthetase 6, peroxisomal; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AMP-binding protein 6.448e-11
N-terminus
sp_v3.0_unigene37687 SustainPine v3.0 1844
• AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9S6X4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 1.015e-33
Putative Complete
sp_v3.0_unigene38730 SustainPine v3.0 1382
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.447e-38
C-terminus
sp_v3.0_unigene41396 SustainPine v3.0 680
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42676 SustainPine v3.0 251
• AutoFact: Acyl-activating enzyme 11 n=3 Tax=Arabidopsis RepID=Q84P19_ARATH 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene43144 SustainPine v3.0 128
• AutoFact: 4-coumarate--CoA ligase-like 7 [Arabidopsis thaliana] sp|Q9M0X9.1|4CLL7_ARATH RecName: Full=4-coumarate--CoA ligase-like 7; AltName: Full=4-coumarate--CoA ligase isoform 6; Short=At4CL6 emb|CAB81058.1| 4-coumarate--CoA ligase-like protein [Arabidopsis tha 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 8.69e-08
Internal
sp_v3.0_unigene44498 SustainPine v3.0 331
• AutoFact: [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 2.0e-09
• FL-Next: sp=Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Long-chain-fatty-acid CoA ligase, putative 5.586e-09
Internal
sp_v3.0_unigene44509 SustainPine v3.0 324
• AutoFact: 4-coumarate--CoA ligase-like 7 n=3 Tax=Brassicaceae RepID=4CLL7_ARATH 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 4-coumarate-coa ligase 4.868e-08
Internal
sp_v3.0_unigene45172 SustainPine v3.0 217
• AutoFact: Putative AMP-binding protein [Oryza sativa Japonica Group] 5.0e-27
• FL-Next: sp=Probable acyl-activating enzyme 16, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Acyl-CoA synthetase-like protein 4.617e-09
Internal
sp_v3.0_unigene46543 SustainPine v3.0 190
• AutoFact: AMP dependent ligase, putative n=1 Tax=Ricinus communis RepID=B9SIR3_RICCO 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene46789 SustainPine v3.0 329
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.483e-34
Internal
sp_v3.0_unigene47323 SustainPine v3.0 231
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ45_CYCRE 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.057e-33
Internal
sp_v3.0_unigene49362 SustainPine v3.0 129
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49384 SustainPine v3.0 277
• AutoFact: benzoyloxyglucosinolate 1 [Arabidopsis thaliana] gb|AAF06049.1|AC009513_5 Similar to gb|X94625 amp-binding protein from Brassica napus and is a member of the PF|00501 AMP-binding enzymes [Arabidopsis thaliana] gb|AEE34436.1| benzoyloxyglucosinolate 1 [Ara 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase acetate-coa synthetase-like protein 1.264e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain