Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ubiquitin-protein ligase activity

Term: GO:0004842  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5594 SustainPine v3.0 1904
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 6.584e-09
Internal
sp_v3.0_unigene5612 SustainPine v3.0 3082
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.895e-08
C-terminus
sp_v3.0_unigene5650 SustainPine v3.0 2257
AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Brca1 associated ring domain, putative 5.669e-09
C-terminus
sp_v3.0_unigene5699 SustainPine v3.0 2149
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.19e-08
Complete
sp_v3.0_unigene5830 SustainPine v3.0 1336
AutoFact: Ubiquitin; TRAF-like [Medicago truncatula] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5933 SustainPine v3.0 1675
AutoFact: KAP multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-protein ligase 2.712e-06
C-terminus
sp_v3.0_unigene6177 SustainPine v3.0 2835
AutoFact: DNA-binding protein-like [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Pisum sativum (Garden pea). 0.0
Sma3: Retinoblastoma-binding protein, putative 1.715e-12
Putative Complete
sp_v3.0_unigene6237 SustainPine v3.0 1825
AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene6395 SustainPine v3.0 1549
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 6.271e-09
Internal
sp_v3.0_unigene6445 SustainPine v3.0 1890
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin conjugating enzyme, putative 1.366e-15
Putative Complete
sp_v3.0_unigene6683 SustainPine v3.0 850
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata 1.403e-34
C-terminus
sp_v3.0_unigene6840 SustainPine v3.0 1784
AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein, putative 1.711e-06
Putative C-terminus
sp_v3.0_unigene7088 SustainPine v3.0 4325
AutoFact: U-box multi-domain protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 7.807e-12
Complete
sp_v3.0_unigene7114 SustainPine v3.0 2228
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene7119 SustainPine v3.0 2665
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein 11 1.546e-13
Complete
sp_v3.0_unigene7167 SustainPine v3.0 2429
AutoFact: pfam04564, U-box, U-box domain 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7196 SustainPine v3.0 3207
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Sma3: TIR1-like protein 9.369e-20
Complete
sp_v3.0_unigene7281 SustainPine v3.0 1110
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein binding protein 4.723e-08
C-terminus
sp_v3.0_unigene7343 SustainPine v3.0 1641
AutoFact: Unassigned protein
FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene7392 SustainPine v3.0 1218
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9R8N3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 1.534e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain