Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154165 SustainPine v3.0 525
• AutoFact: Alpha tubulin (Fragment) n=2 Tax=Trypanosomatidae RepID=Q9GU32_LEIMA 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.237e-10
C-terminus
sp_v3.0_unigene154242 SustainPine v3.0 446
• AutoFact: PREDICTED: tubulin, beta 2C-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB9C7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 2.532e-10
Internal
sp_v3.0_unigene154306 SustainPine v3.0 486
• AutoFact: Alpha-tubulin, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LMN4_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.634e-12
Putative C-terminus
sp_v3.0_unigene154335 SustainPine v3.0 295
• AutoFact: U3 small nucleolar ribonucleoprotein protein IMP3 p n=1 Tax=Albugo laibachii Nc14 RepID=F0W7J4_9STRA 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein-like 1.666e-06
C-terminus
sp_v3.0_unigene154552 SustainPine v3.0 538
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.5e-24
C-terminus
sp_v3.0_unigene154578 SustainPine v3.0 316
• AutoFact: nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Basic 7S globulin 2 small subunit, putative 4.496e-16
C-terminus
sp_v3.0_unigene154598 SustainPine v3.0 333
• AutoFact: ribosomal protein DL11 [Drosophila melanogaster] prf||2108277A ribosomal protein L11 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene155267 SustainPine v3.0 403
• AutoFact: Ribosomal protein L11 n=1 Tax=Dictyostelium purpureum RepID=F1A1I6_DICPU 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L11 2.445e-11
C-terminus
sp_v3.0_unigene155513 SustainPine v3.0 496
• AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.601e-10
C-terminus
sp_v3.0_unigene155517 SustainPine v3.0 454
• AutoFact: Tubulin beta chain n=1 Tax=Chlorella variabilis RepID=E1ZJM1_9CHLO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-1 chain 3.567e-07
Internal
sp_v3.0_unigene155575 SustainPine v3.0 476
• AutoFact: 60S ribosomal protein L11 n=19 Tax=leotiomyceta RepID=Q4WP20_ASPFU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene155907 SustainPine v3.0 251
• AutoFact: U3 small nucleolar ribonucleoprotein protein IMP3 p n=1 Tax=Albugo laibachii Nc14 RepID=F0W7J4_9STRA 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein-like 1.666e-06
Putative C-terminus
sp_v3.0_unigene156085 SustainPine v3.0 536
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Pleosporineae RepID=B2WFR3_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Complete
sp_v3.0_unigene156332 SustainPine v3.0 382
• AutoFact: ribosomal protein L11-like [Nicotiana tabacum] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene156679 SustainPine v3.0 400
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Schizosaccharomyces RepID=RL11_SCHPO 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene156727 SustainPine v3.0 261
• AutoFact: Copper transporting P-type ATPase n=2 Tax=Cupriavidus RepID=B3R7P6_CUPTR 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copper-transporting atpase p-type, putative 2.943e-13
Internal
sp_v3.0_unigene157050 SustainPine v3.0 460
• AutoFact: Eukaryotic initiation factor 3e n=3 Tax=Oryza sativa RepID=A0MLT8_ORYSJ 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative eukaryotic translation initiation factor 3E 4.33842e-42
Internal
sp_v3.0_unigene157835 SustainPine v3.0 524
• AutoFact: Tubulin alpha-1A chain n=5 Tax=Eukaryota RepID=TBAD_PHYPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.958e-21
Internal
sp_v3.0_unigene158232 SustainPine v3.0 187
• AutoFact: PREDICTED: similar to MGC82596 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48192 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158640 SustainPine v3.0 482
• AutoFact: Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Nematostella vectensis RepID=EIF3E_NEMVE 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative eukaryotic translation initiation factor 3E 1.055e-34
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain