Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151542 SustainPine v3.0 495
• AutoFact: Beta tubulin n=7 Tax=Eukaryota RepID=A8E074_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 5.993e-12
C-terminus
sp_v3.0_unigene151728 SustainPine v3.0 212
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 7.221e-21
Internal
sp_v3.0_unigene151743 SustainPine v3.0 387
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Schizosaccharomyces RepID=RL11_SCHPO 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene151898 SustainPine v3.0 554
• AutoFact: Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl11Bp n=2 Tax=Pichia pastoris RepID=C4R8K3_PICPG 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Complete
sp_v3.0_unigene152103 SustainPine v3.0 433
• AutoFact: Prefoldin subunit 2 n=14 Tax=Theria RepID=PFD2_HUMAN 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene152145 SustainPine v3.0 468
• AutoFact: Catalase n=1 Tax=Trichoplax adhaerens RepID=B3SC13_TRIAD 0.0
• FL-Next: sp=Catalase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Catalase 0.0
Putative N-terminus
sp_v3.0_unigene152172 SustainPine v3.0 345
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.289e-10
C-terminus
sp_v3.0_unigene152531 SustainPine v3.0 295
• AutoFact: Beta tubulin (Fragment) n=2 Tax=Acanthamoeba RepID=Q102R4_ACACA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.922e-12
Putative C-terminus
sp_v3.0_unigene152848 SustainPine v3.0 316
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3JUJ9_PUCGT 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.554e-11
C-terminus
sp_v3.0_unigene152954 SustainPine v3.0 351
• AutoFact: Ribosomal protein L11 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MM1_CRAGI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene153062 SustainPine v3.0 483
• AutoFact: 60S ribosomal protein L11 [Neurospora crassa OR74A] sp|Q7RVN0.2|RL11_NEUCR RecName: Full=60S ribosomal protein L11 gb|EAA36404.2| 60S ribosomal protein L11 [Neurospora crassa OR74A] gb|EGO53163.1| 60S ribosomal protein L11 [Neurospora tetrasperma FGSC 250 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene153284 SustainPine v3.0 420
• AutoFact: PREDICTED: ribosomal protein L11-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF8D 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene153324 SustainPine v3.0 428
• AutoFact: Beta-tubulin n=2 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C6T6_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 5.508e-09
Putative C-terminus
sp_v3.0_unigene153360 SustainPine v3.0 503
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.534e-09
C-terminus
sp_v3.0_unigene153424 SustainPine v3.0 111
• AutoFact: Beta-tubulin (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=Q5JBR0_9STRA 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 1.193e-13
Internal
sp_v3.0_unigene153553 SustainPine v3.0 304
• AutoFact: PREDICTED: similar to TNP2 n=1 Tax=Vitis vinifera RepID=UPI00019854B7 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposon protein, putative, CACTA, En/Spm sub-class 1.826e-38
Internal
sp_v3.0_unigene153645 SustainPine v3.0 373
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 6.703e-21
Putative C-terminus
sp_v3.0_unigene153836 SustainPine v3.0 526
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.507e-29
Putative N-terminus
sp_v3.0_unigene153909 SustainPine v3.0 387
• AutoFact: tubulin alpha-1 chain [Aspergillus oryzae RIB40] ref|XP_002383310.1| tubulin beta subunit [Aspergillus flavus NRRL3357] dbj|BAE54761.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED47130.1| tubulin beta subunit [Aspergillus flavus NRRL3357] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 7.245e-15
C-terminus
sp_v3.0_unigene153991 SustainPine v3.0 403
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.434e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain