Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat, cysteine-containing subtype

Term: IPR006553  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene78 SustainPine v3.0 2871
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat family protein, expressed 6.67e-06
Complete
sp_v3.0_unigene715 SustainPine v3.0 3097
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat family protein, expressed 6.67e-06
Complete
sp_v3.0_unigene1435 SustainPine v3.0 3375
• AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EIN3-binding F-box protein 1 2.315e-13
Complete
sp_v3.0_unigene2080 SustainPine v3.0 3187
• AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EIN3-binding F-box protein 2 3.622e-09
Complete
sp_v3.0_unigene2672 SustainPine v3.0 2832
• AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
• FL-Next: sp=F-box/LRR-repeat protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4026 SustainPine v3.0 2531
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SF10_RICCO 0.0
• FL-Next: sp=F-box/LRR-repeat protein 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4999 SustainPine v3.0 346
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8LB33.1|FB330_ARATH RecName: Full=F-box protein At3g58530 gb|AAM64994.1| unknown [Arabidopsis thaliana] gb|AEE79796.1| F-box protein [Arabidopsis thaliana] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene5738 SustainPine v3.0 2155
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat family protein, expressed 6.855e-06
Complete
sp_v3.0_unigene6145 SustainPine v3.0 2382
• AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Skip-2, putative 1.854e-13
Complete
sp_v3.0_unigene6466 SustainPine v3.0 3989
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7549 SustainPine v3.0 1988
• AutoFact: F-box/LRR-repeat protein 5 [Arabidopsis thaliana] ref|NP_001185415.1| F-box/LRR-repeat protein 5 [Arabidopsis thaliana] sp|O49286.1|SKP2B_ARATH RecName: Full=F-box protein SKP2B; AltName: Full=F-box/LRR-repeat protein 5; Short=AtFB5; AltName: Full=SKP2-li 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9471 SustainPine v3.0 655
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene10691 SustainPine v3.0 2082
• AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat family protein, expressed 4.494e-06
Putative Complete
sp_v3.0_unigene11573 SustainPine v3.0 1087
• AutoFact: Unassigned protein
• FL-Next: sp=F-box/LRR-repeat protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene11924 SustainPine v3.0 1985
• AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 3.0e-26
• FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene14464 SustainPine v3.0 2032
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RCS2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20357 SustainPine v3.0 1237
• AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 2.0e-26
• FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene21935 SustainPine v3.0 788
• AutoFact: leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily protein [Arabidopsis thaliana] dbj|BAB11189.1| unnamed protein product [Arabidopsis thaliana] gb|AAL06927.1| AT5g23340/MKD15_20 [Arabidopsis thaliana] gb|AAM91352.1| At5g23340/MKD15_2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene23127 SustainPine v3.0 3602
• AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24164 SustainPine v3.0 1758
• AutoFact: Unassigned protein
• FL-Next: sp=F-box protein At3g58530; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain