Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13051 SustainPine v3.0 982
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gb|AAP21246.1| At3g51280 [Arabidopsis thaliana] dbj|BAE99956.1| MS5 like protein [Arabidopsis thaliana] gb|AEE78773.1| tetrat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollenless3 1.129e-11
N-terminus
sp_v3.0_unigene13211 SustainPine v3.0 946
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13508 SustainPine v3.0 1214
AutoFact: adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis thaliana] gb|ABE65860.1| protein kinase family protein [Arabidopsis thaliana] gb|AEC07567.1| adenine nucleotide alpha hydrolase domain-containing protein kinase [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase 3.773e-18
Putative C-terminus
sp_v3.0_unigene13575 SustainPine v3.0 1114
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene13737 SustainPine v3.0 3300
AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 4.114e-22
Complete
sp_v3.0_unigene13797 SustainPine v3.0 1155
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene14019 SustainPine v3.0 930
AutoFact: gametophytic factor 2 [Arabidopsis thaliana] dbj|BAC43188.1| putative DnaJ protein [Arabidopsis thaliana] gb|AED95612.1| gametophytic factor 2 [Arabidopsis thaliana] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DnaJ protein-like 6.122e-07
N-terminus
sp_v3.0_unigene14069 SustainPine v3.0 615
AutoFact: Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8L9.1|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gb|AAO4224 9.99967e-42
FL-Next: sp=Uncharacterized TPR repeat-containing protein At2g32450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene14115 SustainPine v3.0 863
AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=4 Tax=Oryza sativa RepID=CRYD_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.825e-16
Internal
sp_v3.0_unigene14202 SustainPine v3.0 2647
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAK44004.1|AF370189_1 unknown protein [Arabidopsis thaliana] gb|AAL33778.1| unknown protein [Arabidopsis thaliana] gb|AEE86768.1| tetratricopeptide repeat domain-containing prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14993 SustainPine v3.0 1484
AutoFact: ATP binding protein n=2 Tax=Andropogoneae RepID=B6U8H2_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 8.042e-22
C-terminus
sp_v3.0_unigene16299 SustainPine v3.0 3187
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin light chain, putative 1.882e-14
Putative Complete
sp_v3.0_unigene16564 SustainPine v3.0 452
AutoFact: DUF3493 domain containing protein 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene16667 SustainPine v3.0 1923
AutoFact: CTR1-like protein kinase n=1 Tax=Rosa hybrid cultivar RepID=Q93XL9_ROSHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Map3k delta-1 protein kinase, putative 2.054e-26
Complete
sp_v3.0_unigene17226 SustainPine v3.0 1181
AutoFact: FLU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17372 SustainPine v3.0 775
AutoFact: [R] COG5091 Suppressor of G2 allele of skp1 and related proteins 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SGT1 1.406e-14
Putative Complete
sp_v3.0_unigene17492 SustainPine v3.0 2359
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RBP6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17835 SustainPine v3.0 4568
AutoFact: Small glutamine-rich tetratricopeptide repeat-containing protein A, putative n=1 Tax=Ricinus communis RepID=B9SE65_RICCO 0.0
FL-Next: sp=TPR repeat-containing thioredoxin TTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene17860 SustainPine v3.0 763
AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-soluble NSF attachment protein 2.733e-23
C-terminus
sp_v3.0_unigene18062 SustainPine v3.0 670
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain