Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin interacting motif

Term: IPR003903  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79382 SustainPine v3.0 177
• AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 1.0e-05
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 8.772e-06
Internal
sp_v3.0_unigene80848 SustainPine v3.0 172
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene81614 SustainPine v3.0 234
• AutoFact: alanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] 8.0e-33
• FL-Next: Isoform Cytoplasmic of Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS 0.0
• Sma3: Alanyl-tRNA synthetase 9.882e-11
Internal
sp_v3.0_unigene96210 SustainPine v3.0 783
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 3.718e-13
Putative C-terminus
sp_v3.0_unigene97259 SustainPine v3.0 345
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 1.0e-07
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene99512 SustainPine v3.0 640
• AutoFact: PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome), partial [Strongylocentrotus purpuratus] ref|XP_780810.2| PREDICTED: similar to ubiquitin protein ligase E3A (human papilloma virus E6-asso 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin-protein ligase 4.755e-09
C-terminus
sp_v3.0_unigene102506 SustainPine v3.0 678
• AutoFact: Dimer_Tnp_hAT domain containing protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: HAT family dimerisation domain containing protein 1.443e-07
Putative C-terminus
sp_v3.0_unigene102606 SustainPine v3.0 449
• AutoFact: Unassigned protein 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene103079 SustainPine v3.0 836
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104231 SustainPine v3.0 294
• AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 6.0e-12
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104293 SustainPine v3.0 298
• AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 4.0e-11
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene109061 SustainPine v3.0 141
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 5.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118019 SustainPine v3.0 386
• AutoFact: putative protein kinase [Arabidopsis thaliana] 4.0e-36
• FL-Next: sp=Serine/threonine-protein kinase CTR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119349 SustainPine v3.0 281
• AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 3.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123529 SustainPine v3.0 196
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 7.0e-16
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123678 SustainPine v3.0 175
• AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 3.0e-14
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 6.584e-09
Internal
sp_v3.0_unigene127615 SustainPine v3.0 1004
• AutoFact: Dimer_Tnp_hAT domain containing protein 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr17 scaffold_85, whole genome shotgun sequence 6.707e-06
C-terminus
sp_v3.0_unigene127653 SustainPine v3.0 549
• AutoFact: 26S proteasome non-atpase regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9T6I9_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome non-atpase regulatory subunit, putative 6.46e-10
C-terminus
sp_v3.0_unigene127798 SustainPine v3.0 487
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene129013 SustainPine v3.0 298
• AutoFact: Ataxin-3 like protein [Arabidopsis thaliana] sp|Q9M391.1|ATX3H_ARATH RecName: Full=Ataxin-3 homolog; AltName: Full=MJD1a-like; AltName: Full=Machado-Joseph disease-like protein emb|CAB70987.1| Machado-Joseph disease MJD1a-like protein [Arabidopsis thalian 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain