Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Transcription factor GRAS

Term: IPR005202  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55881 SustainPine v3.0 376
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene55941 SustainPine v3.0 289
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.267e-11
Putative N-terminus
sp_v3.0_unigene57697 SustainPine v3.0 343
AutoFact: RVT_2 domain containing protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene58164 SustainPine v3.0 302
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene58856 SustainPine v3.0 203
AutoFact: GRAS family transcription factor LATERAL n=1 Tax=Populus trichocarpa RepID=B9GHZ4_POPTR 1.0e-11
FL-Next: tr=SCARECROW-like protein; Pinus taeda (Loblolly pine). 0.0
Sma3: GRAS family transcription factor LATERAL 4.545e-15
Internal
sp_v3.0_unigene59082 SustainPine v3.0 417
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 4.0e-36
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 7.701e-11
Internal
sp_v3.0_unigene59942 SustainPine v3.0 292
AutoFact: RVT_2 domain containing protein 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.962e-07
Putative N-terminus
sp_v3.0_unigene59999 SustainPine v3.0 318
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Polyprotein 3.569e-11
Putative C-terminus
sp_v3.0_unigene60712 SustainPine v3.0 347
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SLF0_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene60989 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: sp=UNC93-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61348 SustainPine v3.0 212
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 4.0e-16
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 5.753e-18
Internal
sp_v3.0_unigene61979 SustainPine v3.0 352
AutoFact: F20P5.25 protein n=1 Tax=Arabidopsis thaliana RepID=O04543_ARATH 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene62189 SustainPine v3.0 318
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene62207 SustainPine v3.0 215
AutoFact: Phytochrome A-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0Z8K8_PICSI 2.0e-18
FL-Next: tr=SCARECROW-like protein; Pinus taeda (Loblolly pine). 0.0
Sma3: GRAS family transcription factor 1.857e-15
Internal
sp_v3.0_unigene63420 SustainPine v3.0 129
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 2.0e-09
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 1.112e-17
Internal
sp_v3.0_unigene63814 SustainPine v3.0 296
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.115e-22
N-terminus
sp_v3.0_unigene64936 SustainPine v3.0 335
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene66478 SustainPine v3.0 387
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.105e-11
N-terminus
sp_v3.0_unigene67980 SustainPine v3.0 303
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-33
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Sma3: Protein SCARECROW 8.239e-17
Internal
sp_v3.0_unigene68067 SustainPine v3.0 172
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 2.0e-23
FL-Next: tr=SCARECROW-like protein; Pinus taeda (Loblolly pine). 0.0
Sma3: GRAS family transcription factor 2.751e-17
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain