Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PDZ domain

Term: IPR001478  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene71468 SustainPine v3.0 248
• AutoFact: Protein tyrosine, putative n=1 Tax=Ricinus communis RepID=B9SF75_RICCO 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71994 SustainPine v3.0 207
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73116 SustainPine v3.0 133
• AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 1.0e-08
• FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73347 SustainPine v3.0 164
• AutoFact: Os01g0664000 protein n=4 Tax=Oryza sativa RepID=Q0JKM5_ORYSJ 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75833 SustainPine v3.0 509
• AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76077 SustainPine v3.0 293
• AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79002 SustainPine v3.0 259
• AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NK08_PICSI 4.0e-31
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.953e-25
Internal
sp_v3.0_unigene94715 SustainPine v3.0 365
• AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 9.00054e-42
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene99920 SustainPine v3.0 844
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
• FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pumilio-family RNA binding repeat containing protein, expressed 2.023e-11
Internal
sp_v3.0_unigene99968 SustainPine v3.0 942
• AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protease degQ, putative 5.447e-08
Putative C-terminus
sp_v3.0_unigene104906 SustainPine v3.0 358
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 2.0e-23
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene106344 SustainPine v3.0 243
• AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 4.0e-34
• FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107837 SustainPine v3.0 370
• AutoFact: [J] COG5099 RNA-binding protein of the Puf family, translational repressor 7.0e-22
• FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pumilio-family RNA binding repeat containing protein, expressed 7.437e-08
Putative C-terminus
sp_v3.0_unigene107863 SustainPine v3.0 311
• AutoFact: Serine protease n=1 Tax=Arabidopsis thaliana RepID=F4ITR5_ARATH 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene111067 SustainPine v3.0 210
• AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 7.0e-16
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111338 SustainPine v3.0 817
• AutoFact: DegP protease-like n=3 Tax=Oryza sativa RepID=Q6ZIR2_ORYSJ 6.0e-29
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein binding protein, putative 2.281e-06
Internal
sp_v3.0_unigene111348 SustainPine v3.0 792
• AutoFact: DegP protease-like n=3 Tax=Oryza sativa RepID=Q6ZIR2_ORYSJ 5.0e-28
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124542 SustainPine v3.0 282
• AutoFact: Contains similarity to RNA binding protein PufA from Dictyostelium discoideum gi|5106561 and contains multiple Pumilio-family RNA binding PF|00806 domains [Arabidopsis thaliana] 3.0e-25
• FL-Next: sp=Putative pumilio homolog 8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pumilio-family RNA binding repeat containing protein, expressed 9.84e-12
Internal
sp_v3.0_unigene125560 SustainPine v3.0 485
• AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
• FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene128632 SustainPine v3.0 279
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 1.0e-08
• FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain