Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene149344
|
SustainPine v3.0
|
330
|
• AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI
|
4.0e-28
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-like retroelement pol polyprotein
|
4.9e-09
|
|
Internal
|
sp_v3.0_unigene150055
|
SustainPine v3.0
|
117
|
• AutoFact: Unassigned protein
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
sp_v3.0_unigene153588
|
SustainPine v3.0
|
434
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
1.0e-35
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.106e-18
|
|
Internal
|
sp_v3.0_unigene155532
|
SustainPine v3.0
|
335
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
5.0e-27
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.652e-17
|
|
Internal
|
sp_v3.0_unigene159563
|
SustainPine v3.0
|
417
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
3.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.06e-11
|
|
Internal
|
sp_v3.0_unigene159619
|
SustainPine v3.0
|
485
|
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR
|
0.0
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
Putative C-terminus
|
sp_v3.0_unigene159734
|
SustainPine v3.0
|
309
|
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ
|
7.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.542e-13
|
|
Internal
|
sp_v3.0_unigene159748
|
SustainPine v3.0
|
442
|
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA
|
7.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.97e-37
|
|
Internal
|
sp_v3.0_unigene159815
|
SustainPine v3.0
|
371
|
• AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA
|
4.0e-30
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
2.073e-07
|
|
Internal
|
sp_v3.0_unigene159832
|
SustainPine v3.0
|
485
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
4.0e-36
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.359e-16
|
|
Internal
|
sp_v3.0_unigene159931
|
SustainPine v3.0
|
503
|
• AutoFact: putative beta-glucosidase [Oryza sativa Japonica Group] gb|AAV32242.1| putative beta-glucosidase [Oryza sativa Japonica Group]
|
2.0e-26
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Beta-glucosidase, putative
|
0.0
|
|
Putative Complete
|
sp_v3.0_unigene160115
|
SustainPine v3.0
|
489
|
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR
|
5.99994e-41
|
• FL-Next: tr=Integrase; subsp. trichocarpa).
|
0.0
|
|
Internal
|
sp_v3.0_unigene160384
|
SustainPine v3.0
|
467
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
4.0e-33
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.52e-09
|
|
Internal
|
sp_v3.0_unigene160388
|
SustainPine v3.0
|
493
|
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE
|
5.0e-29
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.082e-14
|
|
Internal
|
sp_v3.0_unigene160443
|
SustainPine v3.0
|
364
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
3.0e-28
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.933e-16
|
|
Internal
|
sp_v3.0_unigene160577
|
SustainPine v3.0
|
316
|
• AutoFact: rve domain containing protein
|
5.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.74e-15
|
|
Internal
|
sp_v3.0_unigene160730
|
SustainPine v3.0
|
389
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
1.0e-30
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.159e-13
|
|
Internal
|
sp_v3.0_unigene161001
|
SustainPine v3.0
|
331
|
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH
|
9.0e-18
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene161084
|
SustainPine v3.0
|
444
|
• AutoFact: rve domain containing protein
|
7.0e-14
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.43e-11
|
|
Internal
|
sp_v3.0_unigene161151
|
SustainPine v3.0
|
338
|
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME
|
5.0e-31
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.046e-17
|
|
Internal
|