Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12477 SustainPine v3.0 3611
• AutoFact: putative potassium transporter [Vicia faba] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium transporter, putative 9.855e-40
Complete
sp_v3.0_unigene12631 SustainPine v3.0 928
• AutoFact: TIR/NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J1_PINTA 6.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS-coding resistance gene protein 7.937e-06
Putative N-terminus
sp_v3.0_unigene12661 SustainPine v3.0 1875
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 3.49e-08
C-terminus
sp_v3.0_unigene12898 SustainPine v3.0 3657
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.935e-21
Complete
sp_v3.0_unigene13064 SustainPine v3.0 634
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 4.268e-31
C-terminus
sp_v3.0_unigene13142 SustainPine v3.0 766
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 2.274e-09
Internal
sp_v3.0_unigene13191 SustainPine v3.0 1633
• AutoFact: PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] ref|NP_973987.1| PPPDE putative thiol peptidase family protein [Arabidopsis thaliana] gb|AAL87252.1| unknown protein [Arabidopsis thaliana] gb|AAM45073.1| unknown protein [Arabidopsis th 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EREBP-4 like protein 5.306e-19
Complete
sp_v3.0_unigene13490 SustainPine v3.0 1155
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gd2b, putative 1.318e-09
C-terminus
sp_v3.0_unigene13514 SustainPine v3.0 1668
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 4.946e-11
N-terminus
sp_v3.0_unigene13626 SustainPine v3.0 413
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.663e-20
Internal
sp_v3.0_unigene13631 SustainPine v3.0 798
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.181e-17
Internal
sp_v3.0_unigene13677 SustainPine v3.0 957
• AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T9S4_RICCO 0.0
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Kinase, putative 1.496e-06
Internal
sp_v3.0_unigene13698 SustainPine v3.0 549
• AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative wall-associated kinase 4 4.745e-21
Internal
sp_v3.0_unigene13863 SustainPine v3.0 623
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14030 SustainPine v3.0 992
• AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene14050 SustainPine v3.0 771
• AutoFact: Putative NBS-LRR protein G8106 (Fragment) n=1 Tax=Pinus monticola RepID=Q6WE84_PINMO 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14224 SustainPine v3.0 843
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 3.642e-09
Internal
sp_v3.0_unigene14230 SustainPine v3.0 1209
• AutoFact: Potassium transporter 17 n=2 Tax=Andropogoneae RepID=B6T8T1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium transporter, putative 2.01787e-43
C-terminus
sp_v3.0_unigene14281 SustainPine v3.0 1011
• AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 3.55e-19
C-terminus
sp_v3.0_unigene14318 SustainPine v3.0 2293
• AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Von Willebrand factor type A domain containing protein, expressed 9.722e-07
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain