Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8500 SustainPine v3.0 817
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene8507 SustainPine v3.0 2150
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene8577 SustainPine v3.0 1385
AutoFact: protein trichome birefringence-like 36 [Arabidopsis thaliana] gb|AAK96825.1| putative protein [Arabidopsis thaliana] gb|AAM10080.1| putative protein [Arabidopsis thaliana] gb|AEE79205.1| protein trichome birefringence-like 36 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lustrin A-like 1.153e-10
Putative Complete
sp_v3.0_unigene8624 SustainPine v3.0 2250
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_196, whole genome shotgun sequence 9.197e-07
C-terminus
sp_v3.0_unigene8639 SustainPine v3.0 1253
AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-conjugating enzyme-like 2.01e-15
Complete
sp_v3.0_unigene8725 SustainPine v3.0 1924
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycogen synthase kinase-3 beta, putative 1.767e-16
Complete
sp_v3.0_unigene8832 SustainPine v3.0 1930
AutoFact: PREDICTED: similar to nucleic acid binding , related n=1 Tax=Vitis vinifera RepID=UPI00019860F7 0.0
FL-Next: sp=Uncharacterized protein At4g26485; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_142, whole genome shotgun sequence 1.415e-11
Complete
sp_v3.0_unigene8910 SustainPine v3.0 2105
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FERONIA receptor-like kinase 1.189e-17
Misassembled
sp_v3.0_unigene8946 SustainPine v3.0 3624
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr2 scaffold_196, whole genome shotgun sequence 8.889e-07
Complete
sp_v3.0_unigene8999 SustainPine v3.0 694
AutoFact: COP1 homolog [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP1 9.329e-11
Putative C-terminus
sp_v3.0_unigene9069 SustainPine v3.0 2172
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.289e-16
Complete
sp_v3.0_unigene9122 SustainPine v3.0 2655
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Myosin XI, putative 2.329e-12
Complete
sp_v3.0_unigene9156 SustainPine v3.0 1626
AutoFact: ania-6a type cyclin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-L1-1 4.556e-09
Putative Complete
sp_v3.0_unigene9599 SustainPine v3.0 1709
AutoFact: ABC2_membrane_3 multi-domain protein 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9705 SustainPine v3.0 893
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 1.0e-15
FL-Next: sp=Probable receptor-like protein kinase At5g61350; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene9760 SustainPine v3.0 961
AutoFact: Hemolysin III-related family protein (Fragment) n=1 Tax=Lilium longiflorum RepID=A6MH02_LILLO 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene9881 SustainPine v3.0 754
AutoFact: PREDICTED: similar to nucleic acid binding , related n=1 Tax=Vitis vinifera RepID=UPI00019860F7 0.0
FL-Next: sp=Uncharacterized protein At4g26485; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_142, whole genome shotgun sequence 1.527e-11
Putative Complete
sp_v3.0_unigene10003 SustainPine v3.0 1130
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lustrin A-like 5.319e-07
N-terminus
sp_v3.0_unigene10150 SustainPine v3.0 2064
AutoFact: Monosaccharide transport protein 1 n=3 Tax=Andropogoneae RepID=Q6B4G9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sugar transporter, putative 4.80645e-43
Complete
sp_v3.0_unigene10262 SustainPine v3.0 2801
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9S4D1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium transporter, putative 3.78351e-44
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain