Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Radical SAM

Term: IPR007197  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15080 SustainPine v3.0 2584
AutoFact: DUF21 domain containing protein 1.0e-35
FL-Next: sp=DUF21 domain-containing protein At1g47330; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene17596 SustainPine v3.0 1875
AutoFact: Os01g0883900 protein n=3 Tax=Oryza sativa RepID=Q0JH49_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 9.634e-24
C-terminus
sp_v3.0_unigene18331 SustainPine v3.0 1940
AutoFact: biotin synthase [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene27977 SustainPine v3.0 2440
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene28461 SustainPine v3.0 2009
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene29034 SustainPine v3.0 718
AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Catalytic, putative 4.528e-06
C-terminus
sp_v3.0_unigene29129 SustainPine v3.0 1715
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35177 SustainPine v3.0 545
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 2.0e-33
FL-Next: Isoform 2 of DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 0.0
Internal
sp_v3.0_unigene41006 SustainPine v3.0 1045
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDK5RAP1-like protein 6.904e-09
N-terminus
sp_v3.0_unigene42729 SustainPine v3.0 542
AutoFact: UPF0004 domain containing protein 1.0e-32
FL-Next: sp=CDK5RAP1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: CDK5RAP1-like protein 3.06e-09
Internal
sp_v3.0_unigene49260 SustainPine v3.0 224
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9REL9_RICCO 2.0e-10
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene50588 SustainPine v3.0 240
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9REL9_RICCO 1.0e-12
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene53831 SustainPine v3.0 202
AutoFact: Biotin synthase n=2 Tax=Glycine max RepID=Q2XPR6_SOYBN 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Biotin synthase 1.717e-23
Internal
sp_v3.0_unigene57911 SustainPine v3.0 320
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63233 SustainPine v3.0 132
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SHU6_PHYPA 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63533 SustainPine v3.0 178
AutoFact: FO synthase [Azoarcus sp. EbN1] emb|CAI10697.1| hypothetical protein, similar to ThiH,4-methyl-5(beta-hydroxyethyl)thiazole phosphate synthesis [Aromatoleum aromaticum EbN1] 8.0e-12
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene63598 SustainPine v3.0 114
AutoFact: Lipoyl synthase, chloroplastic n=1 Tax=Ricinus communis RepID=LISC_RICCO 4.0e-07
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthetase 2.484e-12
Internal
sp_v3.0_unigene64569 SustainPine v3.0 195
AutoFact: FO synthase [Sphingomonas wittichii RW1] gb|ABQ67084.1| FO synthase subunit 1 / FO synthase subunit 2 [Sphingomonas wittichii RW1] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene64580 SustainPine v3.0 275
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9SHC0_RICCO 3.0e-34
FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
Sma3: Catalytic, putative 6.055e-06
Internal
sp_v3.0_unigene67844 SustainPine v3.0 323
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain