Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chromatin binding

Term: GO:0003682  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene163990 SustainPine v3.0 111
AutoFact: Putative retrotransposon protein n=1 Tax=Malus x domestica RepID=E4Z8P7_MALDO 7.0e-07
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene163996 SustainPine v3.0 295
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Eleocharis RepID=D5LVM5_9POAL 8.0e-26
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 5.1848e-44
Putative C-terminus
sp_v3.0_unigene164124 SustainPine v3.0 367
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene164141 SustainPine v3.0 395
AutoFact: polyprotein [Glycine max] 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Internal
sp_v3.0_unigene164149 SustainPine v3.0 360
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gag-Pol polyprotein 2.25e-08
Putative Complete
sp_v3.0_unigene164156 SustainPine v3.0 397
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 2.895e-13
Internal
sp_v3.0_unigene164160 SustainPine v3.0 291
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=OSJNBa0054D14.1 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164200 SustainPine v3.0 224
AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 3.0e-15
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.048e-10
Internal
sp_v3.0_unigene164221 SustainPine v3.0 338
AutoFact: Putative retroelement n=1 Tax=Oryza sativa RepID=Q8S6I8_ORYSA 5.0e-16
FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164321 SustainPine v3.0 214
AutoFact: Nucleosome/chromatin assembly factor A n=3 Tax=Andropogoneae RepID=Q94F78_MAIZE 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene164343 SustainPine v3.0 260
AutoFact: Unassigned protein
FL-Next: tr=H0321H01.8 protein; Oryza sativa (Rice). 0.0
Internal
sp_v3.0_unigene164389 SustainPine v3.0 217
AutoFact: rve domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.806e-20
Internal
sp_v3.0_unigene164394 SustainPine v3.0 360
AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gag-Pol polyprotein 3.07e-09
Internal
sp_v3.0_unigene164410 SustainPine v3.0 370
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-27
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Pol protein integrase region 8.42e-25
Internal
sp_v3.0_unigene164458 SustainPine v3.0 312
AutoFact: rve domain containing protein 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.261e-40
Putative Complete
sp_v3.0_unigene164525 SustainPine v3.0 280
AutoFact: Os10g0317000 protein n=2 Tax=Oryza sativa RepID=Q7XFZ5_ORYSJ 6.0e-28
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.823e-12
Putative N-terminus
sp_v3.0_unigene164548 SustainPine v3.0 218
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 7.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.892e-18
Putative C-terminus
sp_v3.0_unigene164601 SustainPine v3.0 422
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.087e-17
Putative C-terminus
sp_v3.0_unigene164613 SustainPine v3.0 401
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164641 SustainPine v3.0 207
AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
Sma3: Polyprotein 8.129e-07
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain