Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene46733
|
SustainPine v3.0
|
600
|
• AutoFact: RVT_1 domain containing protein
|
3.0e-19
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene46789
|
SustainPine v3.0
|
329
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE
|
1.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
4.483e-34
|
|
Internal
|
sp_v3.0_unigene46855
|
SustainPine v3.0
|
688
|
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
• Sma3: Pol protein integrase region
|
0.0
|
|
Internal
|
sp_v3.0_unigene46861
|
SustainPine v3.0
|
357
|
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE
|
9.0e-29
|
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
1.331e-12
|
|
Internal
|
sp_v3.0_unigene47323
|
SustainPine v3.0
|
231
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ45_CYCRE
|
4.0e-19
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.057e-33
|
|
Internal
|
sp_v3.0_unigene47780
|
SustainPine v3.0
|
722
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.921e-17
|
|
Internal
|
sp_v3.0_unigene48229
|
SustainPine v3.0
|
4333
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Polyprotein
|
9.513e-09
|
|
Complete
|
sp_v3.0_unigene49458
|
SustainPine v3.0
|
512
|
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q7XYU1_GOSHI
|
5.0e-34
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Gag-Pol polyprotein
|
5.766e-13
|
|
Putative Complete
|
sp_v3.0_unigene49513
|
SustainPine v3.0
|
4243
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.186e-15
|
|
Complete
|
sp_v3.0_unigene49924
|
SustainPine v3.0
|
365
|
• AutoFact: OSJNBa0091D06.8 protein n=1 Tax=Oryza sativa RepID=Q7XU13_ORYSA
|
4.0e-28
|
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.12e-10
|
|
Internal
|
sp_v3.0_unigene50669
|
SustainPine v3.0
|
752
|
• AutoFact: RVT_1 domain containing protein
|
2.0e-08
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.49e-11
|
|
Putative Complete
|
sp_v3.0_unigene50872
|
SustainPine v3.0
|
246
|
• AutoFact: OSJNBa0087O24.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XPJ7_ORYSJ
|
1.0e-15
|
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Sma3: OSJNBa0087O24.13 protein
|
7.31e-06
|
|
Internal
|
sp_v3.0_unigene51270
|
SustainPine v3.0
|
546
|
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA
|
8.0e-37
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
• Sma3: Gag-pol polyprotein, putative
|
2.505e-07
|
|
Internal
|
sp_v3.0_unigene51376
|
SustainPine v3.0
|
529
|
• AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q94LA8_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.696e-20
|
|
Internal
|
sp_v3.0_unigene51554
|
SustainPine v3.0
|
193
|
• AutoFact: Putative polyprotein n=1 Tax=Zea mays RepID=Q8SA93_MAIZE
|
8.0e-11
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
sp_v3.0_unigene51662
|
SustainPine v3.0
|
447
|
• AutoFact: rve domain containing protein
|
3.0e-13
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.27518e-43
|
|
Internal
|
sp_v3.0_unigene51711
|
SustainPine v3.0
|
412
|
• AutoFact: Reverse transcriptase (Fragment) n=7 Tax=Prunus mume RepID=C8C9R0_PRUMU
|
0.0
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.991e-35
|
|
Putative Complete
|
sp_v3.0_unigene51712
|
SustainPine v3.0
|
404
|
• AutoFact: Reverse transcriptase (Fragment) n=7 Tax=Prunus mume RepID=C8C9R0_PRUMU
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Reverse transcriptase
|
1.43e-21
|
|
C-terminus
|
sp_v3.0_unigene51713
|
SustainPine v3.0
|
413
|
• AutoFact: RVT_1 domain containing protein
|
2.0e-20
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.4013e-45
|
|
Putative Complete
|
sp_v3.0_unigene51714
|
SustainPine v3.0
|
406
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI
|
1.0e-39
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Reverse transcriptase
|
8.6e-17
|
|
Putative Complete
|