Sustainpine_db
HomeAssembliesBLASTSearchInstitutions


Name: chromatin

Term: GO:0000785  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26997 SustainPine v3.0 903
AutoFact: lectin-like receptor kinase 7;3 [Medicago truncatula] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.847e-35
C-terminus
sp_v3.0_unigene27335 SustainPine v3.0 712
AutoFact: Elongation factor EF-3 n=1 Tax=Ectocarpus siliculosus RepID=D7FW62_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene27508 SustainPine v3.0 1270
AutoFact: receptor lectin kinase [Arabidopsis thaliana] sp|O80939.1|LRK41_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.1; Short=Arabidopsis thaliana lectin-receptor kinase e; Short=AthlecRK-e; Short=LecRK-IV.1; AltName: Full=Lectin Recepto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 3.066e-26
Putative C-terminus
sp_v3.0_unigene27595 SustainPine v3.0 910
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.211e-19
Complete
sp_v3.0_unigene28435 SustainPine v3.0 692
AutoFact: Elongation factor 3, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NKR0_PHYIT 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter 4.564e-06
C-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene29396 SustainPine v3.0 1253
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 1.0e-27
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.52e-36
Putative N-terminus
sp_v3.0_unigene29458 SustainPine v3.0 1097
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Glycine-rich protein 2.375e-19
coding
sp_v3.0_unigene29500 SustainPine v3.0 859
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 8.0e-09
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene29518 SustainPine v3.0 1206
AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene29619 SustainPine v3.0 637
AutoFact: Fibrinogen and fibronectin n=1 Tax=Culex quinquefasciatus RepID=B0WKJ3_CULQU 1.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.757e-14
coding
sp_v3.0_unigene29675 SustainPine v3.0 1026
AutoFact: Drf_FH1 multi-domain protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich protein 2.6e-19
Complete
sp_v3.0_unigene29755 SustainPine v3.0 718
AutoFact: Terminal flower 2 protein n=5 Tax=Malus x domestica RepID=A7M6G1_MALDO 2.0e-18
FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LIKE HETEROCHROMATIN PROTEIN 1 5.58e-09
Putative N-terminus
sp_v3.0_unigene29812 SustainPine v3.0 848
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVQ8_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene29814 SustainPine v3.0 529
AutoFact: pfam00385, Chromo, Chromodomain 2.0e-10
FL-Next: sp=Chromo domain-containing protein LHP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene29868 SustainPine v3.0 936
AutoFact: Gly_rich multi-domain protein 8.0e-18
Sma3: Glycine-rich protein 3.365e-14
coding
sp_v3.0_unigene30279 SustainPine v3.0 558
AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.425e-17
Internal
sp_v3.0_unigene30354 SustainPine v3.0 937
AutoFact: Gly_rich multi-domain protein 8.0e-19
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 8.582e-15
coding
sp_v3.0_unigene32634 SustainPine v3.0 515
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain