Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromo domain/shadow

Term: IPR000953  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10593 SustainPine v3.0 669
AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.941e-26
Internal
sp_v3.0_unigene10648 SustainPine v3.0 1282
AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Sma3: Cinnamoyl-CoA reductase 0.0
Putative Complete
sp_v3.0_unigene10846 SustainPine v3.0 1398
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamoyl-CoA reductase 7.35682e-43
Complete
sp_v3.0_unigene11240 SustainPine v3.0 3090
AutoFact: putative PDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative Complete
sp_v3.0_unigene11790 SustainPine v3.0 1264
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene11811 SustainPine v3.0 1356
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene12013 SustainPine v3.0 1342
AutoFact: Cinnamoyl-CoA reductase n=3 Tax=Pinaceae RepID=B3VKE9_9CONI 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Sma3: Cinnamoyl-CoA reductase 0.0
Complete
sp_v3.0_unigene12119 SustainPine v3.0 708
AutoFact: Putative zinc finger protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6L4V6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12604 SustainPine v3.0 537
AutoFact: receptor-like kinase LRK10 [Hordeum vulgare subsp. vulgare] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rust resistance kinase Lr10 7.776e-37
Internal
sp_v3.0_unigene13088 SustainPine v3.0 1185
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 5.962e-27
Internal
sp_v3.0_unigene13426 SustainPine v3.0 639
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 5.022e-29
Internal
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene14896 SustainPine v3.0 293
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Putative N-terminus
sp_v3.0_unigene14968 SustainPine v3.0 2035
AutoFact: histone acetyltransferase protein HAC108 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase 6.133e-28
Putative Complete
sp_v3.0_unigene15477 SustainPine v3.0 618
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.637e-14
Putative Complete
sp_v3.0_unigene15846 SustainPine v3.0 965
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-13
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.618e-06
N-terminus
sp_v3.0_unigene15965 SustainPine v3.0 1028
AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene16798 SustainPine v3.0 413
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene17515 SustainPine v3.0 1500
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
FL-Next: sp=Tetraketide alpha-pyrone reductase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cinnamoyl-CoA reductase 2.382e-23
Complete
sp_v3.0_unigene17614 SustainPine v3.0 1691
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9T062_RICCO 0.0
FL-Next: sp=Tetraketide alpha-pyrone reductase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cinnamoyl-CoA reductase 2.614e-23
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain