Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cystathionine beta-synthase, core

Term: IPR000644  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6879 SustainPine v3.0 2755
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBS domain-containing protein, putative, expressed 3.593e-11
Complete
sp_v3.0_unigene7127 SustainPine v3.0 2628
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF4 5.58e-09
Complete
sp_v3.0_unigene8308 SustainPine v3.0 2002
AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RAG9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AKIN gamma 4.279e-09
Complete
sp_v3.0_unigene8878 SustainPine v3.0 2094
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin-like protein 2.804e-15
Putative Complete
sp_v3.0_unigene9218 SustainPine v3.0 3568
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10069 SustainPine v3.0 1945
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene10884 SustainPine v3.0 1888
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene11108 SustainPine v3.0 410
AutoFact: AMP-activated protein kinase, gamma regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9RV78_RICCO 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF4b 8.285e-06
C-terminus
sp_v3.0_unigene11544 SustainPine v3.0 1211
AutoFact: CBS domain-containing protein [Solenostemon scutellarioides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11930 SustainPine v3.0 1993
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13863 SustainPine v3.0 623
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14854 SustainPine v3.0 2102
AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14940 SustainPine v3.0 3188
AutoFact: Arabidopsis thaliana CLC-d chloride channel protein (GB:Z71450) 0.0
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chloride channel clc, putative 0.0
Complete
sp_v3.0_unigene15080 SustainPine v3.0 2584
AutoFact: DUF21 domain containing protein 1.0e-35
FL-Next: sp=DUF21 domain-containing protein At1g47330; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene16926 SustainPine v3.0 1486
AutoFact: cystathionine beta-synthase domain-containing protein [Arabidopsis thaliana] sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic; AltName: Full=CBS domain-containing protein 2; Short=AtCDCP2; AltName: Full=Protein LOSS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene17554 SustainPine v3.0 2013
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] gb|AED96402.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17596 SustainPine v3.0 1875
AutoFact: Os01g0883900 protein n=3 Tax=Oryza sativa RepID=Q0JH49_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 9.634e-24
C-terminus
sp_v3.0_unigene17733 SustainPine v3.0 1349
AutoFact: [K] COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17878 SustainPine v3.0 1284
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] sp|Q8GZA4.1|CBSX6_ARATH RecName: Full=CBS domain-containing protein CBSX6 dbj|BAC41791.1| unknown protein [Arabidopsis thaliana] gb|AEE34358.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene21666 SustainPine v3.0 487
AutoFact: Low molecular weight heat-shock protein n=7 Tax=Pinaceae RepID=Q40935_PSEMZ 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat-shock protein, putative 8.982e-34
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain