Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene58641 SustainPine v3.0 468
• AutoFact: PDR-like ABC transporter n=4 Tax=Oryza sativa RepID=Q8GU83_ORYSJ 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 1.895e-13
Internal
sp_v3.0_unigene58681 SustainPine v3.0 400
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene58976 SustainPine v3.0 304
• AutoFact: ABC transporter [Catharanthus roseus] 6.0e-36
• FL-Next: sp=ABC transporter G family member 32; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette transporter, putative 1.474e-38
Internal
sp_v3.0_unigene59067 SustainPine v3.0 395
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.554e-11
C-terminus
sp_v3.0_unigene59082 SustainPine v3.0 417
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 4.0e-36
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 7.701e-11
Internal
sp_v3.0_unigene59373 SustainPine v3.0 395
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.757e-17
Internal
sp_v3.0_unigene59962 SustainPine v3.0 266
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ7_RICCO 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 3.529e-26
Internal
sp_v3.0_unigene59999 SustainPine v3.0 318
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Polyprotein 3.569e-11
Putative C-terminus
sp_v3.0_unigene60340 SustainPine v3.0 355
• AutoFact: OSIGBa0134J07.9 protein n=1 Tax=Oryza sativa RepID=Q01LI0_ORYSA 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.329e-13
Internal
sp_v3.0_unigene60971 SustainPine v3.0 359
• AutoFact: Abc transporter, putative n=1 Tax=Ricinus communis RepID=B9SKT4_RICCO 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene61229 SustainPine v3.0 191
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 2.434e-07
N-terminus
sp_v3.0_unigene61747 SustainPine v3.0 240
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.201e-12
Internal
sp_v3.0_unigene61768 SustainPine v3.0 240
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene62123 SustainPine v3.0 313
• AutoFact: RecName: Full=Probable pleiotropic drug resistance protein 1 tpg|DAA00884.1| TPA_exp: PDR1 ABC transporter [Oryza sativa (japonica cultivar-group)] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 3.2e-20
Internal
sp_v3.0_unigene62232 SustainPine v3.0 264
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene62331 SustainPine v3.0 169
• AutoFact: Os01g0609200 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0JLC6_ORYSJ 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene62405 SustainPine v3.0 261
• AutoFact: ABC transporter G family member 28 [Arabidopsis thaliana] sp|Q9FF46.1|AB28G_ARATH RecName: Full=ABC transporter G family member 28; Short=ABC transporter ABCG.28; Short=AtABCG28; AltName: Full=Putative white-brown complex homolog protein 29; Short=AtWBC29 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 1.672e-10
Putative N-terminus
sp_v3.0_unigene62767 SustainPine v3.0 309
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene63050 SustainPine v3.0 240
• AutoFact: ABC transporter-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5Z410_ORYSJ 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 2.257e-13
Internal
sp_v3.0_unigene63456 SustainPine v3.0 292
• AutoFact: ABC-2 type transporter-like protein [Arabidopsis thaliana] sp|Q9ZUU9.2|AB3G_ARATH RecName: Full=ABC transporter G family member 3; Short=ABC transporter ABCG.3; Short=AtABCG3; AltName: Full=White-brown complex homolog protein 3; Short=AtWBC3 gb|AEC08075.1 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 1.679e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain