Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene122 SustainPine v3.0 1216
AutoFact: histone deacetylase, putative [Arabidopsis thaliana] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene190 SustainPine v3.0 1747
AutoFact: histone deacetylase 15 [Arabidopsis thaliana] gb|AEE76110.1| histone deacetylase 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 4.049e-14
C-terminus
sp_v3.0_unigene452 SustainPine v3.0 1578
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene621 SustainPine v3.0 1601
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene663 SustainPine v3.0 2576
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene836 SustainPine v3.0 2489
AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1 alpha 3.665e-06
Complete
sp_v3.0_unigene1235 SustainPine v3.0 3833
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1513 SustainPine v3.0 2089
AutoFact: RNA-binding protein-like [Oryza sativa Japonica Group] gb|EEE69405.1| hypothetical protein OsJ_28765 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene1796 SustainPine v3.0 1187
AutoFact: U1 snRNP-interacting 70 kDa protein [Triticum aestivum] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 5.633e-12
Complete
sp_v3.0_unigene2425 SustainPine v3.0 2906
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc-finger protein 5.796e-07
Complete
sp_v3.0_unigene3259 SustainPine v3.0 1762
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.094e-39
C-terminus
sp_v3.0_unigene3360 SustainPine v3.0 1341
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4049 SustainPine v3.0 3369
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.094e-39
Complete
sp_v3.0_unigene4135 SustainPine v3.0 1884
AutoFact: Ran BP2/NZF zinc finger domain-containing protein [Arabidopsis thaliana] sp|Q8GZ43.1|YZR3_ARATH RecName: Full=RanBP2-type zinc finger protein At1g67325 dbj|BAC41896.1| unknown protein [Arabidopsis thaliana] gb|AAO63346.1| At1g67325 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5562 SustainPine v3.0 1831
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5666 SustainPine v3.0 2764
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6189 SustainPine v3.0 1636
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7798 SustainPine v3.0 896
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 9.94922e-44
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene8000 SustainPine v3.0 740
AutoFact: flowering promoting factor 1 [Arabidopsis thaliana] emb|CAA72717.1| FPF1 protein [Arabidopsis thaliana] gb|ABE02402.1| At5g24860 [Arabidopsis thaliana] gb|AED93370.1| flowering promoting factor 1 [Arabidopsis thaliana] 8.0e-30
FL-Next: sp=Flowering-promoting factor 1; Sinapis alba (White mustard) (Brassica hirta). 0.0
Sma3: FPF1 protein 1.818e-09
Complete
sp_v3.0_unigene8206 SustainPine v3.0 2534
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein ariadne-1, putative 1.068e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain