Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene104877 SustainPine v3.0 361
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107037 SustainPine v3.0 638
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 9.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107497 SustainPine v3.0 357
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 2.80199e-40
Internal
sp_v3.0_unigene107858 SustainPine v3.0 438
AutoFact: Histone deacetylase hda1, putative n=1 Tax=Ricinus communis RepID=B9RE34_RICCO 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 5.387e-14
Internal
sp_v3.0_unigene107974 SustainPine v3.0 524
AutoFact: Histone deacetylase RPD3/HDA1 class II n=3 Tax=Triticeae RepID=C1IC96_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 3.488e-14
Internal
sp_v3.0_unigene112854 SustainPine v3.0 293
AutoFact: Protein kinase PINOID n=3 Tax=Brassicaceae RepID=O64682_ARATH 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.291e-33
Internal
sp_v3.0_unigene115326 SustainPine v3.0 322
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA polymerase 1.204e-09
Internal
sp_v3.0_unigene118183 SustainPine v3.0 277
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene121568 SustainPine v3.0 263
AutoFact: Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] gb|AAG51125.1|AC069144_22 hypothetical protein [Arabidopsis thaliana] gb|AEE33177.1| Zn-finger in Ran binding domain-containing protein [Arabidopsis thaliana] 2.0e-25
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene122635 SustainPine v3.0 432
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125790 SustainPine v3.0 258
AutoFact: DNA polymerase n=3 Tax=Selaginella moellendorffii RepID=D8RZN4_SELML 3.0e-25
FL-Next: sp=DNA polymerase delta catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase 2.851e-12
Internal
sp_v3.0_unigene126053 SustainPine v3.0 213
AutoFact: PREDICTED: similar to putative serine/threonine protein kinase n=1 Tax=Vitis vinifera RepID=UPI00019841C9 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 9.049e-33
Internal
sp_v3.0_unigene126606 SustainPine v3.0 1238
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene128590 SustainPine v3.0 448
AutoFact: Ran BP2/NZF zinc finger domain-containing protein [Arabidopsis thaliana] sp|Q8GZ43.1|YZR3_ARATH RecName: Full=RanBP2-type zinc finger protein At1g67325 dbj|BAC41896.1| unknown protein [Arabidopsis thaliana] gb|AAO63346.1| At1g67325 [Arabidopsis thaliana] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zn-finger, RanBP-type, containing protein 2.834e-08
Putative C-terminus
sp_v3.0_unigene129828 SustainPine v3.0 275
AutoFact: protein kinase like protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 8.157e-23
Internal
sp_v3.0_unigene130593 SustainPine v3.0 455
AutoFact: Unassigned protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative NEP1-interacting protein 4.629e-13
C-terminus
sp_v3.0_unigene131194 SustainPine v3.0 434
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene131782 SustainPine v3.0 881
AutoFact: RRM_1 multi-domain protein 4.0e-09
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene138685 SustainPine v3.0 167
unknown
sp_v3.0_unigene139577 SustainPine v3.0 385
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S5B9_RICCO 3.0e-21
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain