Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8254 SustainPine v3.0 1457
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene8594 SustainPine v3.0 1335
AutoFact: Viroid symptom modulation protein n=2 Tax=Solanum RepID=Q9M728_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.605e-28
C-terminus
sp_v3.0_unigene9335 SustainPine v3.0 1680
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.292e-32
Complete
sp_v3.0_unigene10015 SustainPine v3.0 1192
AutoFact: Gly_rich multi-domain protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10117 SustainPine v3.0 1107
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene10963 SustainPine v3.0 1629
AutoFact: zinc ion binding protein [Arabidopsis thaliana] dbj|BAF00982.1| hypothetical protein [Arabidopsis thaliana] gb|ABM06032.1| At1g55915 [Arabidopsis thaliana] gb|AEE33319.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene11718 SustainPine v3.0 2086
AutoFact: Drf_FH1 multi-domain protein 2.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene13354 SustainPine v3.0 2959
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13588 SustainPine v3.0 2778
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: tr=Os07g0602200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Histone deacetylase 2.484e-14
Complete
sp_v3.0_unigene14196 SustainPine v3.0 697
AutoFact: zf-RanBP domain containing protein 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14448 SustainPine v3.0 529
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R9V5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene18229 SustainPine v3.0 1415
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene18372 SustainPine v3.0 501
AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L24 2.651e-07
N-terminus
sp_v3.0_unigene21071 SustainPine v3.0 1476
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U1 small nuclear ribonucleoprotein 6.725e-12
Putative Complete
sp_v3.0_unigene22219 SustainPine v3.0 661
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24077 SustainPine v3.0 2525
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein ariadne-1, putative 1.068e-10
Complete
sp_v3.0_unigene24573 SustainPine v3.0 697
AutoFact: flowering promoting factor-like 1 [Nicotiana tabacum] 2.0e-30
FL-Next: sp=Flowering-promoting factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: FPF1 protein 1.818e-09
Complete
sp_v3.0_unigene24751 SustainPine v3.0 577
AutoFact: RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana] sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42; Short=AtC3H42 emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana] gb|AAO00832.1| putative RNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene25680 SustainPine v3.0 374
AutoFact: 60S ribosomal protein L24 [Aspergillus oryzae RIB40] ref|XP_002380945.1| 60S ribosomal protein L24a [Aspergillus flavus NRRL3357] dbj|BAE62755.1| unnamed protein product [Aspergillus oryzae RIB40] gb|EED49044.1| 60S ribosomal protein L24a [Aspergillus fla 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L24 1.145e-14
C-terminus
sp_v3.0_unigene25730 SustainPine v3.0 503
AutoFact: Os01g0174700 protein n=3 Tax=Oryza sativa RepID=Q94E49_ORYSJ 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 9.324e-33
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain