Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cyclic nucleotide-binding domain

Term: IPR000595  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7397 SustainPine v3.0 2925
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 5.141e-36
Complete
sp_v3.0_unigene7659 SustainPine v3.0 1030
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 8.316e-27
C-terminus
sp_v3.0_unigene8619 SustainPine v3.0 2192
AutoFact: putative inward rectifying potassium channel [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene9113 SustainPine v3.0 531
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.172e-30
Internal
sp_v3.0_unigene9392 SustainPine v3.0 1289
AutoFact: palmitoyl-CoA hydrolase [Arabidopsis thaliana] gb|AEE27325.1| palmitoyl-CoA hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene9407 SustainPine v3.0 1602
AutoFact: potassium channel TORK1 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel SKOR, putative 2.032e-08
C-terminus
sp_v3.0_unigene9945 SustainPine v3.0 3307
AutoFact: Raffinose_syn domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 9.15e-15
Complete
sp_v3.0_unigene10124 SustainPine v3.0 357
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SF64_RICCO 1.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene10883 SustainPine v3.0 3392
AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 7.083e-15
Complete
sp_v3.0_unigene11262 SustainPine v3.0 591
AutoFact: Cyclic nucleotide-gated ion channel 2 n=5 Tax=Brassicaceae RepID=CNGC2_ARATH 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel 2 1.262e-16
Internal
sp_v3.0_unigene11614 SustainPine v3.0 2395
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 8.887e-20
Complete
sp_v3.0_unigene12899 SustainPine v3.0 843
AutoFact: RecName: Full=Potassium channel AKT1; Short=OsAKT1 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13396 SustainPine v3.0 3562
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|O82226.2|CNGC6_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 6; Short=AtCNGC6; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 6 emb|CAB40131.1| cyclic nucl 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 5.935e-36
Putative Complete
sp_v3.0_unigene14525 SustainPine v3.0 486
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16701 SustainPine v3.0 305
AutoFact: Potassium channel KAT2, putative n=1 Tax=Ricinus communis RepID=B9S124_RICCO 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.648e-15
Internal
sp_v3.0_unigene18903 SustainPine v3.0 955
AutoFact: Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 9.916e-34
Internal
sp_v3.0_unigene19081 SustainPine v3.0 366
AutoFact: Potassium channel n=3 Tax=Andropogoneae RepID=O04242_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.244e-13
Internal
sp_v3.0_unigene20748 SustainPine v3.0 1045
AutoFact: stachyose synthase [Stachys affinis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stachyose synthase 1.687e-24
Putative N-terminus
sp_v3.0_unigene21947 SustainPine v3.0 479
AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene21964 SustainPine v3.0 2847
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9T139_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 7.762e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain