Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, M-domain

Term: IPR004125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4045 SustainPine v3.0 2257
AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Signal recognition particle 54 kD protein, putative 0.0
Complete
sp_v3.0_unigene24126 SustainPine v3.0 464
AutoFact: Ribosomal protein S25 n=1 Tax=Lepidochitona cinerea RepID=E3P7H5_9MOLL 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.226e-16
Complete
sp_v3.0_unigene24249 SustainPine v3.0 685
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene30931 SustainPine v3.0 370
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.575e-16
Complete
sp_v3.0_unigene31139 SustainPine v3.0 445
AutoFact: Ribosomal protein S25 n=3 Tax=Ixodidae RepID=Q4PM82_IXOSC 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 1.897e-20
Complete
sp_v3.0_unigene32567 SustainPine v3.0 500
AutoFact: Putative ribosomal protein S25 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MT3_CRAGI 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 3.587e-16
Complete
sp_v3.0_unigene33155 SustainPine v3.0 2122
AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene150508 SustainPine v3.0 393
AutoFact: 40S ribosomal protein S25 n=1 Tax=Branchiostoma belcheri RepID=RS25_BRABE 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.456e-16
Complete
sp_v3.0_unigene151435 SustainPine v3.0 239
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 5.899e-16
C-terminus
sp_v3.0_unigene151694 SustainPine v3.0 420
AutoFact: Ribosomal protein S25, putative n=2 Tax=Aedes aegypti RepID=Q16SG6_AEDAE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.696e-16
Putative Complete
sp_v3.0_unigene152441 SustainPine v3.0 360
AutoFact: mitochondrial ribosomal protein S25 [Trichoplax adhaerens] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.958e-21
Complete
sp_v3.0_unigene153775 SustainPine v3.0 291
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.671e-21
N-terminus
sp_v3.0_unigene157549 SustainPine v3.0 231
AutoFact: Signal recognition particle 54 kDa protein, putative n=2 Tax=Plasmodium (Plasmodium) RepID=A5K3Q7_PLAVS 9.0e-16
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: SRP54 9.148e-12
Internal
sp_v3.0_unigene203167 SustainPine v3.0 629
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 6.216e-12
Putative Complete
sp_v3.0_unigene204767 SustainPine v3.0 380
AutoFact: Putative ribosomal protein S24 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1X5_9ARAC 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.503e-12
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain