Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Signal recognition particle, SRP54 subunit, helical bundle

Term: IPR013822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1801 SustainPine v3.0 2404
AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene4045 SustainPine v3.0 2257
AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Signal recognition particle 54 kD protein, putative 0.0
Complete
sp_v3.0_unigene9492 SustainPine v3.0 242
AutoFact: putative chloroplast SRP receptor cpFtsY precursor [Oryza sativa Japonica Group] dbj|BAG86738.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC72197.1| hypothetical protein OsI_05275 [Oryza sativa Indica Group] gb|EEE56037.1| hypothetical pr 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9867 SustainPine v3.0 1520
AutoFact: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gb|AEC09286.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1-aminocyclopropane-1-carboxylate oxidase, putative 4.999e-10
Complete
sp_v3.0_unigene24126 SustainPine v3.0 464
AutoFact: Ribosomal protein S25 n=1 Tax=Lepidochitona cinerea RepID=E3P7H5_9MOLL 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.226e-16
Complete
sp_v3.0_unigene24249 SustainPine v3.0 685
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene30931 SustainPine v3.0 370
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.575e-16
Complete
sp_v3.0_unigene31139 SustainPine v3.0 445
AutoFact: Ribosomal protein S25 n=3 Tax=Ixodidae RepID=Q4PM82_IXOSC 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 1.897e-20
Complete
sp_v3.0_unigene32567 SustainPine v3.0 500
AutoFact: Putative ribosomal protein S25 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MT3_CRAGI 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 3.587e-16
Complete
sp_v3.0_unigene33155 SustainPine v3.0 2122
AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene56245 SustainPine v3.0 322
AutoFact: Signal recognition particle receptor alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9STS5_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene64775 SustainPine v3.0 215
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene102041 SustainPine v3.0 584
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
FL-Next: sp=Cell division protein FtsY homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene131246 SustainPine v3.0 553
AutoFact: putative flavonol synthase [Arabidopsis thaliana] 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fe2+ dioxygenase-like 2.156e-12
Internal
sp_v3.0_unigene140557 SustainPine v3.0 510
AutoFact: putative signal recognition particle receptor [Oryza sativa Japonica Group] dbj|BAD10269.1| putative signal recognition particle receptor [Oryza sativa Japonica Group] 8.0e-13
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus
sp_v3.0_unigene150508 SustainPine v3.0 393
AutoFact: 40S ribosomal protein S25 n=1 Tax=Branchiostoma belcheri RepID=RS25_BRABE 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.456e-16
Complete
sp_v3.0_unigene150559 SustainPine v3.0 346
AutoFact: signal recognition particle receptor alpha subunit, [Plasmodium chabaudi chabaudi] emb|CAH76902.1| signal recognition particle receptor alpha subunit, putative [Plasmodium chabaudi chabaudi] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151435 SustainPine v3.0 239
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 5.899e-16
C-terminus
sp_v3.0_unigene151694 SustainPine v3.0 420
AutoFact: Ribosomal protein S25, putative n=2 Tax=Aedes aegypti RepID=Q16SG6_AEDAE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.696e-16
Putative Complete
sp_v3.0_unigene152441 SustainPine v3.0 360
AutoFact: mitochondrial ribosomal protein S25 [Trichoplax adhaerens] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.958e-21
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain