Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Kelch repeat type 1

Term: IPR006652  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene46503 SustainPine v3.0 146
AutoFact: Unassigned protein
FL-Next: sp=tRNA wybutosine-synthesizing protein 2/3/4; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene47303 SustainPine v3.0 379
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene47911 SustainPine v3.0 1229
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene47966 SustainPine v3.0 848
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.2039e-45
N-terminus
sp_v3.0_unigene49604 SustainPine v3.0 1240
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q6NPN5.1|FK113_ARATH RecName: Full=F-box/kelch-repeat protein At5g26960 gb|AAR24662.1| At5g26960 [Arabidopsis thaliana] gb|AED93634.1| F-box/kelch-repeat protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene49634 SustainPine v3.0 1053
AutoFact: pfam02475, Met_10, Met-10+ like-protein 4.0e-35
FL-Next: sp=tRNA wybutosine-synthesizing protein 2/3/4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: tRNA wybutosine-synthesizing protein 3 homolog 2.544e-09
C-terminus
sp_v3.0_unigene50095 SustainPine v3.0 210
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HXC7_POPTR 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50159 SustainPine v3.0 311
AutoFact: Drf_FH1 multi-domain protein 6.0e-28
Sma3: Glycine-rich protein 2.257e-15
coding
sp_v3.0_unigene51376 SustainPine v3.0 529
AutoFact: Polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q94LA8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.696e-20
Internal
sp_v3.0_unigene51445 SustainPine v3.0 619
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene51581 SustainPine v3.0 719
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 6.745e-11
Internal
sp_v3.0_unigene52206 SustainPine v3.0 447
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.674e-18
Internal
sp_v3.0_unigene52405 SustainPine v3.0 357
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.218e-30
Internal
sp_v3.0_unigene53523 SustainPine v3.0 493
AutoFact: CCHC-type integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCC5_POPTR 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 7.878e-09
Internal
sp_v3.0_unigene54511 SustainPine v3.0 488
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene54587 SustainPine v3.0 372
AutoFact: Unassigned protein 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene55965 SustainPine v3.0 436
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.433e-27
N-terminus
sp_v3.0_unigene56740 SustainPine v3.0 500
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.687e-35
N-terminus
sp_v3.0_unigene56803 SustainPine v3.0 426
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.146e-30
Internal
sp_v3.0_unigene59255 SustainPine v3.0 316
AutoFact: pfam01344, Kelch_1, Kelch motif 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain