Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Kelch-type beta propeller

Term: IPR015915  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene73266 SustainPine v3.0 299
AutoFact: Signal transducer, putative n=1 Tax=Ricinus communis RepID=B9RXL2_RICCO 2.0e-19
FL-Next: sp=tRNA wybutosine-synthesizing protein 2/3/4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73278 SustainPine v3.0 199
AutoFact: Unassigned protein
FL-Next: sp=F-box/kelch-repeat protein At5g26960; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene74800 SustainPine v3.0 263
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74814 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene75139 SustainPine v3.0 292
AutoFact: F-box-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E0ZA00_PICSI 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene76475 SustainPine v3.0 336
AutoFact: Kelch domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7Z4_RICCO 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kelch domain-containing protein, putative 3.411e-06
C-terminus
sp_v3.0_unigene77174 SustainPine v3.0 130
AutoFact: F-box/kelch-repeat protein SKIP20 n=2 Tax=Arabidopsis RepID=SKI20_ARATH 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80426 SustainPine v3.0 201
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80713 SustainPine v3.0 160
AutoFact: Unassigned protein 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene80751 SustainPine v3.0 148
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81234 SustainPine v3.0 189
AutoFact: galactose oxidase/kelch repeat-containing protein [Arabidopsis thaliana] ref|NP_001031493.1| galactose oxidase/kelch repeat-containing protein [Arabidopsis thaliana] gb|AAM13022.1| unknown protein [Arabidopsis thaliana] gb|AAM91329.1| unknown protein [Ara 8.0e-09
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: cDNA clone:J033113E15, full insert sequence 7.797e-06
Internal
sp_v3.0_unigene82435 SustainPine v3.0 361
AutoFact: FAP multi-domain protein 2.0e-17
Sma3: Putative glycine-rich cell wall structural protein 6.895e-10
coding
sp_v3.0_unigene86299 SustainPine v3.0 222
Sma3: Serine/threonine protein phosphatase 1.722e-14
coding
sp_v3.0_unigene93694 SustainPine v3.0 1025
AutoFact: tRNA wybutosine-synthesizing protein 2/3/4 n=1 Tax=Oryza sativa Japonica Group RepID=TYW23_ORYSJ 0.0
FL-Next: sp=tRNA wybutosine-synthesizing protein 2/3/4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: tRNA wybutosine-synthesizing protein 3 homolog 2.399e-09
C-terminus
sp_v3.0_unigene94350 SustainPine v3.0 482
AutoFact: kelch repeat-containing protein [Danio rerio] gb|AAW34264.1| kelch repeat-containing protein [Danio rerio] 4.0e-05
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
N-terminus
sp_v3.0_unigene94396 SustainPine v3.0 396
AutoFact: Cyclin-like F-box; Galactose oxidase, central n=1 Tax=Medicago truncatula RepID=A2Q633_MEDTR 2.0e-14
FL-Next: sp=F-box/kelch-repeat protein At5g15710; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: F-box/kelch-repeat protein At5g15710 6.823e-06
Putative N-terminus
sp_v3.0_unigene95873 SustainPine v3.0 563
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] ref|NP_001077785.1| F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9CAG8.1|FBK28_ARATH RecName: Full=F-box/kelch-repeat protein At1g67480 gb|AAG52295.1|AC011020_2 unknown protein [Arabidopsis thalia 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene96781 SustainPine v3.0 342
AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9HXC7_POPTR 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene98697 SustainPine v3.0 1069
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S2C2_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein phosphatase 9.209e-35
C-terminus
sp_v3.0_unigene99204 SustainPine v3.0 471
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9LM55.1|FBK8_ARATH RecName: Full=F-box/kelch-repeat protein At1g22040 gb|AAF86548.1|AC069252_7 F2E2.11 [Arabidopsis thaliana] gb|AAY56413.1| At1g22040 [Arabidopsis thaliana] gb|ABF57275.1| At1g22040 [A 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain