Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S2, eukaryotic/archaeal

Term: IPR005707  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3895 SustainPine v3.0 1601
• AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene19121 SustainPine v3.0 1807
• AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
• FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 40S ribosomal protein SA 3.763e-24
Complete
sp_v3.0_unigene25628 SustainPine v3.0 474
• AutoFact: 40S ribosomal protein SA n=1 Tax=Suberites domuncula RepID=RSSA_SUBDO 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene26325 SustainPine v3.0 319
• AutoFact: 40S ribosomal protein S0 n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=RSSA_PARBA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene35022 SustainPine v3.0 1629
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene56998 SustainPine v3.0 399
• AutoFact: Unassigned protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59018 SustainPine v3.0 204
• AutoFact: 40S ribosomal protein n=4 Tax=Oryza sativa RepID=Q10QU9_ORYSJ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.019e-28
Internal
sp_v3.0_unigene69225 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75825 SustainPine v3.0 276
• AutoFact: 40S ribosomal protein SA n=3 Tax=Zea mays RepID=B6TIC4_MAIZE 5.0e-06
• FL-Next: sp=40S ribosomal protein SA; Daucus carota (Carrot). 0.0
Putative N-terminus
sp_v3.0_unigene81785 SustainPine v3.0 404
• AutoFact: 40S ribosomal protein S0 n=1 Tax=Laccaria bicolor S238N-H82 RepID=RSSA_LACBS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 3.902e-36
Internal
sp_v3.0_unigene140480 SustainPine v3.0 690
• AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 8.518e-25
Misassembled
sp_v3.0_unigene140591 SustainPine v3.0 850
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.883e-36
C-terminus
sp_v3.0_unigene142956 SustainPine v3.0 536
• AutoFact: 40S ribosomal protein SA n=2 Tax=Vitis vinifera RepID=RSSA_VITVI 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.883e-36
Internal
sp_v3.0_unigene143812 SustainPine v3.0 524
unknown
sp_v3.0_unigene150688 SustainPine v3.0 360
• AutoFact: 40S ribosomal protein SA, putative n=3 Tax=Trypanosoma brucei RepID=Q383I8_9TRYP 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152697 SustainPine v3.0 306
• AutoFact: PREDICTED: 40S ribosomal protein SA [Apis mellifera] 3.0e-06
• FL-Next: sp=40S ribosomal protein SA; Ostreococcus lucimarinus (strain CCE9901). 0.0
Putative C-terminus
sp_v3.0_unigene156465 SustainPine v3.0 350
• AutoFact: Laminin-binding protein n=1 Tax=Acanthamoeba healyi RepID=Q6V4W8_9EUKA 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene157079 SustainPine v3.0 211
• AutoFact: 40S ribosomal protein SA n=1 Tax=Nematostella vectensis RepID=RSSA_NEMVE 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.11e-36
Internal
sp_v3.0_unigene157098 SustainPine v3.0 353
• AutoFact: Putative ribosomal protein SA (Fragment) n=1 Tax=Barentsia elongata RepID=A8WCG5_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.32e-36
Internal
sp_v3.0_unigene157305 SustainPine v3.0 171
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 5.057e-37
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain