Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter-like

Term: IPR003439  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29003 SustainPine v3.0 1007
• AutoFact: ABC transporter I family member 20 [Arabidopsis thaliana] sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC transporter I family member 20; Short=ABC transporter ABCI.20; Short=AtABCI20; AltName: Full=GCN-related protein 3; AltName: Full=Non-intrinsic ABC protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_27, whole genome shotgun sequence 0.0
N-terminus
sp_v3.0_unigene29048 SustainPine v3.0 5411
• AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 7.709e-17
Complete
sp_v3.0_unigene29192 SustainPine v3.0 777
• AutoFact: ATP-binding cassette transporter n=3 Tax=Ectocarpus siliculosus RepID=D7FHL6_ECTSI 9.0e-35
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene29349 SustainPine v3.0 619
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene29518 SustainPine v3.0 1206
• AutoFact: Dimer_Tnp_hAT domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene29618 SustainPine v3.0 1040
• AutoFact: Phosphate abc transporter, putative n=1 Tax=Ricinus communis RepID=B9S7S7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29630 SustainPine v3.0 875
• AutoFact: Glycosyltransferase UGT88A9 n=1 Tax=Hieracium pilosella RepID=B2CZL4_HIEPL 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Anthocyanidin 5,3-O-glucosyltransferase 1.613e-21
C-terminus
sp_v3.0_unigene30987 SustainPine v3.0 615
• AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9SA21_RICCO 8.99634e-43
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene31773 SustainPine v3.0 666
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IJZ6_POPTR 2.0e-25
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene32190 SustainPine v3.0 406
• AutoFact: [P] COG1117 ABC-type phosphate transport system, ATPase component 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene32594 SustainPine v3.0 545
• AutoFact: ATP-binding cassette transporter, subfamily B, member 11, group MDR/PGP protein PpABCB11 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U052_PHYPA 5.0e-27
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene32634 SustainPine v3.0 515
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene32969 SustainPine v3.0 4965
• AutoFact: RecName: Full=Putative pleiotropic drug resistance protein 7 emb|CAD59570.1| PDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD24998.1| PDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD25007.1| PDR-like ABC transporter [Oryza sati 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Complete
sp_v3.0_unigene33280 SustainPine v3.0 512
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8R3R8_SELML 1.0e-12
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene33807 SustainPine v3.0 2898
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein 2.063e-24
Complete
sp_v3.0_unigene34194 SustainPine v3.0 997
• AutoFact: ABC transporter G family member 39 [Arabidopsis thaliana] sp|Q7PC84.1|AB39G_ARATH RecName: Full=ABC transporter G family member 39; Short=ABC transporter ABCG.39; Short=AtABCG39; AltName: Full=Probable pleiotropic drug resistance protein 11 tpg|DAA00879.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
C-terminus
sp_v3.0_unigene34269 SustainPine v3.0 1646
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Putative C-terminus
sp_v3.0_unigene34541 SustainPine v3.0 2302
• AutoFact: ABC transporter G family member 7 [Arabidopsis thaliana] ref|NP_973392.1| ABC transporter G family member 7 [Arabidopsis thaliana] sp|Q9ZU35.1|AB7G_ARATH RecName: Full=ABC transporter G family member 7; Short=ABC transporter ABCG.7; Short=AtABCG7; AltName 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene34948 SustainPine v3.0 1364
• AutoFact: F-box protein [Arabidopsis thaliana] ref|NP_001190761.1| F-box protein [Arabidopsis thaliana] sp|O49508.1|FB237_ARATH RecName: Full=F-box protein At4g18380 emb|CAA16718.1| hypothetical protein [Arabidopsis thaliana] emb|CAB78840.1| hypothetical protein [A 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box domain containing protein 5.858e-16
C-terminus
sp_v3.0_unigene35066 SustainPine v3.0 2027
• AutoFact: putative ABC transporter, 5'-partial [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ABC transporter, 5'-partial 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain