Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, ABCE

Term: IPR013283  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64897 SustainPine v3.0 154
• AutoFact: Orf490 protein n=4 Tax=Oryza RepID=Q8HCR1_ORYSJ 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.205e-36
Internal
sp_v3.0_unigene65050 SustainPine v3.0 210
• AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 7.961e-08
N-terminus
sp_v3.0_unigene70338 SustainPine v3.0 369
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 3.639e-11
N-terminus
sp_v3.0_unigene78874 SustainPine v3.0 218
• AutoFact: [R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog 7.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 68 kDa protein HP68 1.113e-08
Misassembled
sp_v3.0_unigene94230 SustainPine v3.0 639
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.652e-11
N-terminus
sp_v3.0_unigene122684 SustainPine v3.0 427
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene141431 SustainPine v3.0 478
• AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 7.961e-08
N-terminus
sp_v3.0_unigene141951 SustainPine v3.0 697
• AutoFact: RNaseL inhibitor-like protein n=1 Tax=Dictyostelium discoideum RepID=Q8T8P2_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 5.026e-11
Putative C-terminus
sp_v3.0_unigene148055 SustainPine v3.0 410
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 1.624e-10
N-terminus
sp_v3.0_unigene149185 SustainPine v3.0 207
• AutoFact: DUF3464 domain containing protein 2.0e-15
• FL-Next: sp=Protein PAM68, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative uncharacterized protein T18B16.70 9.26e-06
Internal
sp_v3.0_unigene151276 SustainPine v3.0 304
• AutoFact: ATP-binding cassette sub-family E member 1 n=4 Tax=Culicidae RepID=B0WJ03_CULQU 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 5.026e-11
Internal
sp_v3.0_unigene155339 SustainPine v3.0 332
• AutoFact: PREDICTED: ATP-binding cassette sub-family E member 1-like, partial n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA0F6 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rnase l inhibitor, putative 1.649e-08
C-terminus
sp_v3.0_unigene156772 SustainPine v3.0 406
• AutoFact: ATP-binding cassette sub-family E member 1 [Toxoplasma gondii] gb|ABH06908.1| ATP-binding cassette sub-family E member 1 [Toxoplasma gondii] gb|ABH06909.1| ATP-binding cassette sub-family E member 1 [Toxoplasma gondii] gb|ABH06910.1| ATP-binding cassette 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 6.002e-11
C-terminus
sp_v3.0_unigene157567 SustainPine v3.0 172
• AutoFact: Os10g0432200 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0IXI4_ORYSJ 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rnase l inhibitor, putative 1.649e-08
Internal
sp_v3.0_unigene160483 SustainPine v3.0 408
• AutoFact: NV19190; similar to pol polyprotein 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene161538 SustainPine v3.0 402
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.46e-26
Internal
sp_v3.0_unigene163697 SustainPine v3.0 310
• AutoFact: RVT_2 domain containing protein 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 1.765e-07
Internal
sp_v3.0_unigene164025 SustainPine v3.0 360
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 9.213e-08
N-terminus
sp_v3.0_unigene164190 SustainPine v3.0 267
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164797 SustainPine v3.0 338
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain