Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

Term: IPR017900  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene158393 SustainPine v3.0 188
• AutoFact: Putative iron-sulfur cluster binding protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB66_ALHEH 5.0e-13
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159364 SustainPine v3.0 529
• AutoFact: apoptosis-linked 2 protein [Lubomirskia baicalensis] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich protein A3 9.084e-09
Putative N-terminus
sp_v3.0_unigene159988 SustainPine v3.0 420
• AutoFact: Glycine-rich protein n=2 Tax=Arabidopsis RepID=D7M9Z2_ARALL 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene160483 SustainPine v3.0 408
• AutoFact: NV19190; similar to pol polyprotein 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene161538 SustainPine v3.0 402
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.46e-26
Internal
sp_v3.0_unigene163169 SustainPine v3.0 358
• AutoFact: glycine-rich protein [Medicago truncatula] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene163697 SustainPine v3.0 310
• AutoFact: RVT_2 domain containing protein 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein, putative 1.765e-07
Internal
sp_v3.0_unigene164025 SustainPine v3.0 360
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 9.213e-08
N-terminus
sp_v3.0_unigene164190 SustainPine v3.0 267
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164797 SustainPine v3.0 338
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene165366 SustainPine v3.0 372
• AutoFact: NADH-quinone oxidoreductase subunit I n=4 Tax=Pleosporineae RepID=B2VSC6_PYRTR 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADH-ubiquinone oxidoreductase 23 kDa subunit 9.686e-15
C-terminus
sp_v3.0_unigene165880 SustainPine v3.0 437
• AutoFact: Probable mannitol dehydrogenase n=2 Tax=Medicago sativa RepID=MTDH_MEDSA 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamyl alcohol dehydrogenase-like protein 4.475e-24
C-terminus
sp_v3.0_unigene165922 SustainPine v3.0 388
• AutoFact: NADH-ubiquinone oxidoreductase 23 kDa subunit n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NYH0_COPC7 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADH dehydrogenase subunit 8 2.246e-08
Putative N-terminus
sp_v3.0_unigene166660 SustainPine v3.0 261
• AutoFact: 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Medicago truncatula RepID=A2Q2W7_MEDTR 6.0e-20
• FL-Next: tr=4Fe-4S ferredoxin, iron-sulfur binding; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene167916 SustainPine v3.0 324
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.34e-35
Internal
sp_v3.0_unigene172409 SustainPine v3.0 266
• AutoFact: Bindin multi-domain protein 2.0e-07
• Sma3: Glycine-rich protein A3 1.097e-08
coding
sp_v3.0_unigene174498 SustainPine v3.0 385
• AutoFact: WWbp multi-domain protein 5.0e-11
coding
sp_v3.0_unigene182859 SustainPine v3.0 1248
• AutoFact: putative cinnamyl alcohol dehydrogenase 1 [Arabidopsis thaliana] sp|Q9CAI3.1|CADH1_ARATH RecName: Full=Probable cinnamyl alcohol dehydrogenase 1; Short=AtCAD1 gb|AAG51850.1|AC010926_13 putative cinnamyl-alcohol dehydrogenase; 49641-51171 [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamyl alcohol dehydrogenase 0.0
Putative Complete
sp_v3.0_unigene185037 SustainPine v3.0 458
• AutoFact: pfam10497, zf-4CXXC_R1, Zinc-finger domain of monoamine-oxidase A repressor R1 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene186329 SustainPine v3.0 476
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative retroelement pol polyprotein 1.049e-07
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain