Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 4Fe-4S binding domain

Term: IPR001450  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55941 SustainPine v3.0 289
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.267e-11
Putative N-terminus
sp_v3.0_unigene56803 SustainPine v3.0 426
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.146e-30
Internal
sp_v3.0_unigene56913 SustainPine v3.0 474
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.41e-27
N-terminus
sp_v3.0_unigene57691 SustainPine v3.0 321
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.105e-16
Putative N-terminus
sp_v3.0_unigene63063 SustainPine v3.0 216
• AutoFact: Gag-pol polyprotein n=2 Tax=Populus RepID=Q710T7_POPDE 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene63300 SustainPine v3.0 188
• AutoFact: RVT_2 domain containing protein 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63814 SustainPine v3.0 296
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.115e-22
N-terminus
sp_v3.0_unigene64897 SustainPine v3.0 154
• AutoFact: Orf490 protein n=4 Tax=Oryza RepID=Q8HCR1_ORYSJ 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.205e-36
Internal
sp_v3.0_unigene65050 SustainPine v3.0 210
• AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 7.961e-08
N-terminus
sp_v3.0_unigene70338 SustainPine v3.0 369
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 3.639e-11
N-terminus
sp_v3.0_unigene78874 SustainPine v3.0 218
• AutoFact: [R] COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog 7.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 68 kDa protein HP68 1.113e-08
Misassembled
sp_v3.0_unigene81487 SustainPine v3.0 129
• AutoFact: cytosolic IMP-GMP specific 5'-nucleotidase, putative; 41097-37373 [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene83462 SustainPine v3.0 254
• AutoFact: PREDICTED: similar to hCG1783917, n=1 Tax=Monodelphis domestica RepID=UPI0000F2EA6F 2.0e-05
• Sma3: Glycine-rich protein A3 1.859e-15
coding
sp_v3.0_unigene94230 SustainPine v3.0 639
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.652e-11
N-terminus
sp_v3.0_unigene113797 SustainPine v3.0 205
• AutoFact: Photosystem I iron-sulfur center n=281 Tax=Eukaryota RepID=PSAC_ARATH 2.0e-29
• FL-Next: sp=Photosystem I iron-sulfur center; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: PsaC 0.0
C-terminus
sp_v3.0_unigene114683 SustainPine v3.0 544
• AutoFact: 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Medicago truncatula RepID=A2Q2W7_MEDTR 1.0e-35
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene122684 SustainPine v3.0 427
• AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene125477 SustainPine v3.0 499
• AutoFact: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Arabidopsis thaliana] gb|AAM12975.1| cytosolic IMP-GMP specific 5-nucleotidase, putative [Arabidopsis thaliana] gb|AAO30041.1| cytosolic IMP-GMP specific 5-nucleotidase, putative [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene141431 SustainPine v3.0 478
• AutoFact: ABC transporter E family member 2 n=13 Tax=Spermatophyta RepID=AB2E_ARATH 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 7.961e-08
N-terminus
sp_v3.0_unigene141951 SustainPine v3.0 697
• AutoFact: RNaseL inhibitor-like protein n=1 Tax=Dictyostelium discoideum RepID=Q8T8P2_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNase L inhibitor-like protein 5.026e-11
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain