Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: apoptotic process

Term: GO:0006915  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21180 SustainPine v3.0 781
• AutoFact: Disease resistance associated protein (Fragment) n=8 Tax=Pinaceae RepID=Q2VWL9_PICAB 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21181 SustainPine v3.0 912
• AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-1,3-glucanase 0.0
C-terminus
sp_v3.0_unigene21252 SustainPine v3.0 909
• AutoFact: TT_ORF1 multi-domain protein 3.0e-14
• Sma3: Nucleolar GTPase/ATPase p130 (ISS) 8.772e-06
coding
sp_v3.0_unigene21304 SustainPine v3.0 1400
• AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative CC-NBS-LRR protein 0.0
Internal
sp_v3.0_unigene21429 SustainPine v3.0 583
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21526 SustainPine v3.0 1108
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 1.934e-08
N-terminus
sp_v3.0_unigene21538 SustainPine v3.0 1510
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.94273e-44
• FL-Next: sp=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21553 SustainPine v3.0 470
• AutoFact: putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene21601 SustainPine v3.0 693
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 4.0e-36
• FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene21770 SustainPine v3.0 566
• AutoFact: Resistance gene homolog, . (Fragment) n=1 Tax=Pinus radiata RepID=O49121_PINRA 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene21774 SustainPine v3.0 374
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene21812 SustainPine v3.0 649
• AutoFact: RVT_2 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.371e-09
N-terminus
sp_v3.0_unigene21882 SustainPine v3.0 536
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.704e-32
Internal
sp_v3.0_unigene22146 SustainPine v3.0 670
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene22162 SustainPine v3.0 246
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 3.0e-28
• FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene22173 SustainPine v3.0 801
• AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22190 SustainPine v3.0 1372
• AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
• FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 5.208e-09
Putative N-terminus
sp_v3.0_unigene22302 SustainPine v3.0 783
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb03g011780; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene22653 SustainPine v3.0 953
• AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative histone deacetylase complex, SIN3 component 5.176e-16
Putative Complete
sp_v3.0_unigene22672 SustainPine v3.0 1116
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.367e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain