Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4489 SustainPine v3.0 603
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Putative polyprotein 1.103e-09
C-terminus
sp_v3.0_unigene4496 SustainPine v3.0 1827
• AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
• FL-Next: tr=CC-NBS-LRR resistance-like protein; Pinus lambertiana (Sugar pine). 0.0
• Sma3: Putative CC-NBS-LRR protein 0.0
Putative N-terminus
sp_v3.0_unigene4520 SustainPine v3.0 350
• AutoFact: Photosystem I assembly protein ycf3 n=1 Tax=Pinus thunbergii RepID=C3VYX2_PINTH 4.00001e-40
• FL-Next: sp=Photosystem I assembly protein ycf3; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: Photosystem I assembly protein ycf3 0.0
N-terminus
sp_v3.0_unigene4552 SustainPine v3.0 386
• AutoFact: putative receptor protein kinase [Oryza sativa Japonica Group] 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4585 SustainPine v3.0 333
• AutoFact: TIR/P-loop/LRR n=1 Tax=Pinus taeda RepID=Q8L8J0_PINTA 9.0e-39
• FL-Next: tr=TIR/P-loop/LRR; Pinus taeda (Loblolly pine). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 2.274e-09
Putative N-terminus
sp_v3.0_unigene4658 SustainPine v3.0 643
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9SBP1_RICCO 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4667 SustainPine v3.0 319
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.468e-31
Internal
sp_v3.0_unigene4722 SustainPine v3.0 675
• AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran GTPase binding protein, putative 5.724e-22
Putative C-terminus
sp_v3.0_unigene4751 SustainPine v3.0 721
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4807 SustainPine v3.0 664
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 1.817e-09
Internal
sp_v3.0_unigene4810 SustainPine v3.0 803
• AutoFact: Cell division control protein 15 , cdc15, putative n=1 Tax=Ricinus communis RepID=B9S4I8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.409e-13
Internal
sp_v3.0_unigene4813 SustainPine v3.0 878
• AutoFact: Atrophin-1 multi-domain protein 2.0e-16
• Sma3: Extensin-like protein 5.958e-12
coding
sp_v3.0_unigene4827 SustainPine v3.0 286
• AutoFact: White-brown-complex ABC transporter family n=2 Tax=Populus trichocarpa RepID=B9IIG9_POPTR 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 5.659e-19
Internal
sp_v3.0_unigene4832 SustainPine v3.0 614
• AutoFact: LRR_4 domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4886 SustainPine v3.0 1312
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J6_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 0.0
Putative N-terminus
sp_v3.0_unigene4902 SustainPine v3.0 744
• AutoFact: NBS/LRR [Pinus taeda] 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4913 SustainPine v3.0 1097
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene4932 SustainPine v3.0 786
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4933 SustainPine v3.0 316
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene4945 SustainPine v3.0 590
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain