Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Target SNARE coiled-coil domain

Term: IPR000727  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145221 SustainPine v3.0 416
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-34
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene148067 SustainPine v3.0 262
• AutoFact: Unassigned protein
• FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene148152 SustainPine v3.0 275
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.602e-19
Internal
sp_v3.0_unigene148649 SustainPine v3.0 344
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 2.24208e-44
Internal
sp_v3.0_unigene162252 SustainPine v3.0 296
• AutoFact: polyprotein [Glycine max] 1.0e-19
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene162837 SustainPine v3.0 351
• AutoFact: Unassigned protein
• FL-Next: sp=B3 domain-containing transcription factor VAL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene164641 SustainPine v3.0 207
• AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
• FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
• Sma3: Polyprotein 8.129e-07
Internal
sp_v3.0_unigene166312 SustainPine v3.0 333
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166824 SustainPine v3.0 477
• AutoFact: pfam00847, AP2, AP2 domain 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 8.653e-16
Putative Complete
sp_v3.0_unigene167924 SustainPine v3.0 205
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene168023 SustainPine v3.0 360
• AutoFact: Putative integrase (Fragment) n=7 Tax=Cucumis melo RepID=B0B0F4_CUCME 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.604e-10
Internal
sp_v3.0_unigene184962 SustainPine v3.0 499
• AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 5.0e-38
• FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
• Sma3: Transcription factor, putative 9.846e-07
Internal
sp_v3.0_unigene186908 SustainPine v3.0 466
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.7e-21
Putative Complete
sp_v3.0_unigene187353 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.658e-23
Internal
sp_v3.0_unigene189712 SustainPine v3.0 367
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.533e-23
Internal
sp_v3.0_unigene194084 SustainPine v3.0 284
• AutoFact: Qa-SNARE, SYP4/Tlg2p/Syntaxin 16-type n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RUD3_PHYPA 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene199879 SustainPine v3.0 311
• AutoFact: syntaxin 5 [Sclerotinia sclerotiorum 1980] gb|EDN93468.1| syntaxin 5 [Sclerotinia sclerotiorum 1980 UF-70] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Syntaxin 32 3.279e-09
Putative C-terminus
sp_v3.0_unigene203494 SustainPine v3.0 347
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 5.644e-24
N-terminus
sp_v3.0_unigene203528 SustainPine v3.0 482
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene204749 SustainPine v3.0 293
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 1.0e-26
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain