Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, CW-type

Term: IPR011124  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27636 SustainPine v3.0 2319
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene34573 SustainPine v3.0 874
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein F26K9_330 2.924e-06
Putative N-terminus
sp_v3.0_unigene37430 SustainPine v3.0 627
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene39142 SustainPine v3.0 274
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 1.0e-30
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene39191 SustainPine v3.0 504
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene40703 SustainPine v3.0 515
AutoFact: Methyl-CpG-binding domain-containing protein 2 n=2 Tax=Arabidopsis RepID=MBD2_ARATH 3.0e-17
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene42444 SustainPine v3.0 1415
AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 1.141e-12
Putative Complete
sp_v3.0_unigene43125 SustainPine v3.0 933
AutoFact: zf-CW domain containing protein 6.0e-06
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene44658 SustainPine v3.0 827
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 4.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Methyl binding domain protein 1.384e-07
N-terminus
sp_v3.0_unigene45016 SustainPine v3.0 463
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 1.4013e-45
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene47294 SustainPine v3.0 403
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48148 SustainPine v3.0 344
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 1.0e-18
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Internal
sp_v3.0_unigene48335 SustainPine v3.0 391
AutoFact: SDG8 n=3 Tax=Arabidopsis thaliana RepID=A9QA57_ARATH 8.0e-30
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 0.0
Sma3: SET domain protein 4.765e-06
Internal
sp_v3.0_unigene50013 SustainPine v3.0 189
AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 2.0e-18
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 4.079e-06
Internal
sp_v3.0_unigene51098 SustainPine v3.0 196
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 1.0e-11
FL-Next: Isoform 2 of B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 0.0
Internal
sp_v3.0_unigene55980 SustainPine v3.0 391
AutoFact: putative methyl-binding domain (MBD108) protein [Brachypodium sylvaticum] 1.0e-12
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57037 SustainPine v3.0 418
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene58691 SustainPine v3.0 203
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59494 SustainPine v3.0 486
AutoFact: Unassigned protein
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64510 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: tr=Os06g0622000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Zinc finger CW-type coiled-coil domain protein 3-like 4.873e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain