Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: red, far-red light phototransduction

Term: GO:0009585  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene190527 SustainPine v3.0 492
AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Leucoagaricus gongylophorus RepID=E7D8R0_LEUGO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene190571 SustainPine v3.0 442
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=NDK_ACAM1 1.4013e-45
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene191532 SustainPine v3.0 467
AutoFact: Ubiquitin carrier protein n=2 Tax=Rhodophyta RepID=Q7XYB1_GRIJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene192741 SustainPine v3.0 569
AutoFact: Ubiquitin-conjugating enzyme E2 2 n=8 Tax=Bilateria RepID=UBC2_CAEEL 0.0
FL-Next: tr=Putative ubiquitin-conjugating enzyme; Porphyra yezoensis. 0.0
Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene193165 SustainPine v3.0 426
AutoFact: PREDICTED: COP9 constitutive photomorphogenic homolog subunit 2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA118 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 5.08e-13
Putative C-terminus
sp_v3.0_unigene194919 SustainPine v3.0 403
AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome A 0.0
Internal
sp_v3.0_unigene195459 SustainPine v3.0 262
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.451e-11
Internal
sp_v3.0_unigene196315 SustainPine v3.0 200
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 5.0e-24
FL-Next: sp=Phytochrome A-associated F-box protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene196737 SustainPine v3.0 373
AutoFact: R2R3 transcription factor MYB108-like protein 1 n=3 Tax=Vitis vinifera RepID=C3W4Q3_VITVI 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 3.451e-33
N-terminus
sp_v3.0_unigene199749 SustainPine v3.0 753
AutoFact: putative FUSCA protein FUS6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 1 4.617e-09
Putative C-terminus
sp_v3.0_unigene200352 SustainPine v3.0 262
AutoFact: Ubiquitin carrier protein n=1 Tax=Toxoplasma gondii RepID=B9PV70_TOXGO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 0.0
N-terminus
sp_v3.0_unigene202511 SustainPine v3.0 541
AutoFact: Nucleoside diphosphate kinase n=2 Tax=Picea sitchensis RepID=A9NPA6_PICSI 1.0e-18
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene202730 SustainPine v3.0 567
AutoFact: Nucleoside diphosphate kinase n=4 Tax=Daphnia pulex RepID=E9FZ29_DAPPU 0.0
FL-Next: sp=Nucleoside diphosphate kinase 1; Pisum sativum (Garden pea). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene203283 SustainPine v3.0 170
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 2.0e-22
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phytochrome 4.745e-10
Internal
sp_v3.0_unigene203960 SustainPine v3.0 454
AutoFact: CSN complex subunit 6A [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 6a 1.521e-13
C-terminus
sp_v3.0_unigene204990 SustainPine v3.0 461
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Polysphondylium pallidum RepID=D3BL27_POLPA 5.0e-21
FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Internal
sp_v3.0_unigene205468 SustainPine v3.0 376
AutoFact: Nucleoside diphosphate kinase n=2 Tax=Pyrenophora RepID=B2WLH9_PYRTR 2.0e-35
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
N-terminus
sp_v3.0_unigene209845 SustainPine v3.0 593
AutoFact: Nucleoside diphosphate kinase n=2 Tax=Picea sitchensis RepID=A9NPA6_PICSI 2.0e-18
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain