Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein-chromophore linkage

Term: GO:0018298  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1913 SustainPine v3.0 2472
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 6.172e-19
C-terminus
sp_v3.0_unigene2157 SustainPine v3.0 2443
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome N 0.0
C-terminus
sp_v3.0_unigene3154 SustainPine v3.0 4031
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Sma3: Phytochrome 0.0
C-terminus
sp_v3.0_unigene3259 SustainPine v3.0 1762
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.094e-39
C-terminus
sp_v3.0_unigene3502 SustainPine v3.0 2477
• AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 4.206e-17
Complete
sp_v3.0_unigene3515 SustainPine v3.0 653
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome C 0.0
Internal
sp_v3.0_unigene4049 SustainPine v3.0 3369
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.094e-39
Complete
sp_v3.0_unigene4345 SustainPine v3.0 432
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 7.519e-17
Putative Complete
sp_v3.0_unigene4405 SustainPine v3.0 643
• AutoFact: chlorophyll a/b-binding protein [Picea glauca] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.843e-21
Complete
sp_v3.0_unigene4885 SustainPine v3.0 341
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.65e-11
C-terminus
sp_v3.0_unigene8594 SustainPine v3.0 1335
• AutoFact: Viroid symptom modulation protein n=2 Tax=Solanum RepID=Q9M728_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 3.605e-28
C-terminus
sp_v3.0_unigene9335 SustainPine v3.0 1680
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 1.292e-32
Complete
sp_v3.0_unigene10011 SustainPine v3.0 607
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RI95_RICCO 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.032e-39
C-terminus
sp_v3.0_unigene11002 SustainPine v3.0 3096
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 4.81907e-41
Complete
sp_v3.0_unigene11042 SustainPine v3.0 1197
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.018e-30
C-terminus
sp_v3.0_unigene11779 SustainPine v3.0 1301
• AutoFact: Caffeate O-methyltransferase n=4 Tax=Picea RepID=Q5NDD5_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Caffeic acid 3-O-methyltransferase 0.0
Putative Complete
sp_v3.0_unigene12926 SustainPine v3.0 1053
• AutoFact: Light-harvesting complex II protein Lhcb7 n=1 Tax=Populus trichocarpa RepID=B9H5X9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 3.546e-23
Complete
sp_v3.0_unigene13513 SustainPine v3.0 1540
• AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.483e-11
Complete
sp_v3.0_unigene14115 SustainPine v3.0 863
• AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=4 Tax=Oryza sativa RepID=CRYD_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.825e-16
Internal
sp_v3.0_unigene14994 SustainPine v3.0 933
• AutoFact: AGC (CAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein n=2 Tax=Arabidopsis RepID=Q9LT38_ARATH 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 8.715e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain