Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein-chromophore linkage

Term: GO:0018298  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17343 SustainPine v3.0 1136
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 0.0
Complete
sp_v3.0_unigene20373 SustainPine v3.0 1010
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.531e-36
Putative Complete
sp_v3.0_unigene21382 SustainPine v3.0 983
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 5.593e-32
Complete
sp_v3.0_unigene21573 SustainPine v3.0 1325
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.201e-28
Complete
sp_v3.0_unigene22793 SustainPine v3.0 986
AutoFact: Serine/threonine-protein kinase OXI1 n=2 Tax=Arabidopsis RepID=OXI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 1.452e-36
C-terminus
sp_v3.0_unigene25730 SustainPine v3.0 503
AutoFact: Os01g0174700 protein n=3 Tax=Oryza sativa RepID=Q94E49_ORYSJ 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 9.324e-33
Putative C-terminus
sp_v3.0_unigene26037 SustainPine v3.0 1230
AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Putative Complete
sp_v3.0_unigene28994 SustainPine v3.0 2834
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 1.8e-35
Complete
sp_v3.0_unigene33050 SustainPine v3.0 573
AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.205e-18
Internal
sp_v3.0_unigene33408 SustainPine v3.0 312
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 2.0e-17
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Sma3: Phytochrome 3.338e-10
C-terminus
sp_v3.0_unigene33430 SustainPine v3.0 475
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 2.0e-17
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Sma3: Phytochrome 3.338e-10
C-terminus
sp_v3.0_unigene34159 SustainPine v3.0 1053
AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 3.07e-33
Complete
sp_v3.0_unigene34834 SustainPine v3.0 954
AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 1.747e-20
N-terminus
sp_v3.0_unigene35822 SustainPine v3.0 447
AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 2.0e-28
FL-Next: tr=Light harvesting chlorophyll a /b-binding protein Lhcb1*1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: LHCP 5.87985e-42
C-terminus
sp_v3.0_unigene37401 SustainPine v3.0 687
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 1.378e-29
Internal
sp_v3.0_unigene38673 SustainPine v3.0 1776
AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.632e-11
Complete
sp_v3.0_unigene40130 SustainPine v3.0 218
AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=4 Tax=Oryza sativa RepID=CRYD_ORYSJ 1.0e-18
FL-Next: sp=Cryptochrome DASH, chloroplastic/mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene42450 SustainPine v3.0 1008
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 2.083e-16
Putative C-terminus
sp_v3.0_unigene44631 SustainPine v3.0 277
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 1.0e-34
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phytochrome A 1.716e-20
Internal
sp_v3.0_unigene46376 SustainPine v3.0 828
AutoFact: Protein kinase n=3 Tax=Arabidopsis RepID=Q39031_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 2.799e-39
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain