Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein-chromophore linkage

Term: GO:0018298  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene154811 SustainPine v3.0 553
• AutoFact: Chloroplast light-harvesting protein CP29 Lhcb4 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ4_ACEAT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b binding protein Lhcb4 1.455e-08
Internal
sp_v3.0_unigene155394 SustainPine v3.0 311
• AutoFact: Photosystem I P700 chlorophyll a apoprotein (Fragment) n=1 Tax=Pseudochlorella sp. CCAP 211/1A RepID=B9TU94_CHLEL 0.0
• FL-Next: sp=Photosystem I P700 chlorophyll a apoprotein A2; Cathaya argyrophylla. Plastid; Chloroplast. 0.0
• Sma3: P700 chlorophyll a-apoprotein A2 0.0
Internal
sp_v3.0_unigene155529 SustainPine v3.0 276
• AutoFact: Light-harvesting chlorophyll-a/b protein of photosystem I n=3 Tax=Chlamydomonadales RepID=Q75VY8_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Light-harvesting chlorophyll-a/b protein of photosystem I 3.272e-14
Internal
sp_v3.0_unigene156560 SustainPine v3.0 414
• AutoFact: Chlorophyll a-b binding protein type 1 member F3, chloroplastic n=2 Tax=Polypodiales RepID=CB23_POLMU 0.0
• FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: LHCP 3.607e-29
Putative C-terminus
sp_v3.0_unigene156739 SustainPine v3.0 383
• AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.805e-21
Putative N-terminus
sp_v3.0_unigene157302 SustainPine v3.0 242
• AutoFact: Light-harvesting protein of photosystem I n=4 Tax=Chlamydomonadales RepID=D8UIW8_VOLCA 2.0e-16
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 7.021e-25
C-terminus
sp_v3.0_unigene159783 SustainPine v3.0 354
• AutoFact: ZEITLUPE [Mesembryanthemum crystallinum] 5.0e-20
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene165050 SustainPine v3.0 214
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 1.0e-21
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Sma3: Phytochrome A 0.0
Internal
sp_v3.0_unigene168037 SustainPine v3.0 186
• AutoFact: [L] COG0415 Deoxyribodipyrimidine photolyase 7.0e-08
• FL-Next: sp=Cryptochrome DASH, chloroplastic/mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.439e-08
Internal
sp_v3.0_unigene183337 SustainPine v3.0 444
• AutoFact: Cryptochrome 1 n=2 Tax=Solanaceae RepID=Q309E8_NICSY 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cryptochrome 2 8.277e-27
Putative N-terminus
sp_v3.0_unigene185362 SustainPine v3.0 596
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome 1.28e-15
Internal
sp_v3.0_unigene189347 SustainPine v3.0 562
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T6Y2_RICCO 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 3.981e-39
N-terminus
sp_v3.0_unigene194919 SustainPine v3.0 403
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 0.0
Internal
sp_v3.0_unigene195377 SustainPine v3.0 362
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEN4_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 5.928e-30
Internal
sp_v3.0_unigene195973 SustainPine v3.0 372
• AutoFact: Protein kinase KIPK n=2 Tax=Andropogoneae RepID=B6SYF7_MAIZE 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 9.992e-30
Internal
sp_v3.0_unigene202182 SustainPine v3.0 850
• AutoFact: Phosphatidylcholine transfer protein, putative n=1 Tax=Ricinus communis RepID=B9RYW5_RICCO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type III chlorophyll a/b-binding protein 5.009e-08
C-terminus
sp_v3.0_unigene203283 SustainPine v3.0 170
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 2.0e-22
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome 4.745e-10
Internal
sp_v3.0_unigene207815 SustainPine v3.0 492
• AutoFact: Light-harvesting complex n=1 Tax=Selaginella moellendorffii RepID=D8SUF1_SELML 8.00001e-42
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 8.341e-22
C-terminus
sp_v3.0_unigene207985 SustainPine v3.0 286
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 2.00386e-43
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 8.322e-29
Putative C-terminus
sp_v3.0_unigene209229 SustainPine v3.0 263
• AutoFact: Light-harvesting chlorophyll a/b binding protein of photosystem II n=1 Tax=Ginkgo biloba RepID=Q39768_GINBI 1.0e-39
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.374e-29
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain